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View Structure Prediction Details

Protein: CE37540
Organism: Caenorhabditis elegans
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37540.

Description E-value Query
Range
Subject
Range
N6MT2_BOVIN - Protein-lysine N-methyltransferase N6AMT2 OS=Bos taurus GN=N6AMT2 PE=2 SV=1
308.0 [0..1] [218..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTDDIPQL SADTLAALSM FQAEQQEKIE QLQSGIIEKI DEDWQLSQFW YDDETSRKLV  60
   61 AEGVAAALEG SEARPARIGC VSSPTLVKFF HETEEYKTGQ IQLTLFEFDD RFGLKFPTEF 120
  121 VHYDYKHPTD LPAELLAKFD VIIADPPFLA AECLIKTAHS IRLLGKSDVK VLLCTGAIME 180
  181 DYASRLMAMH RTSFEPRHAN NLANDFSCFA NYQTLTFC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.17
Match: 2f8lA
Description: Crystal structure of (16411011) from Listeria monocytogenes LI2 at 2.20 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.16970557486814 bayes_pls_golite062009
transferase activity 0.822796502536128 bayes_pls_golite062009
transcription regulator activity 0.612864078793564 bayes_pls_golite062009
DNA binding 0.590883316793444 bayes_pls_golite062009
nucleic acid binding 0.495242738476094 bayes_pls_golite062009
binding 0.439311894979003 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.356820770014331 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.181009652174389 bayes_pls_golite062009
methyltransferase activity 0.165326524526999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle