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View Structure Prediction Details

Protein: CE37417
Organism: Caenorhabditis elegans
Length: 482 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37417.

Description E-value Query
Range
Subject
Range
gi|47221276 - gi|47221276|emb|CAG13212.1| unnamed protein product [Tetraodon nigroviridis]
637.0 [0..4] [479..5]

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Predicted Domain #1
Region A:
Residues: [1-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFLIFSILF LHLANCDYTP DWESLDNRPL PSWYDDSKFG IFCHWGLYSV PAFRSEWMWW  60
   61 YWKGTQPDKD VVNFVDKNYK PGTTYADFAK DFTAEYFNAN QFAETVKTSG ARYFVFTSKH 120
  121 HEGFTMWPSR TSWNWNSMDI GPKRDIVGEL RDAFKKTDVH FGLYFSQFEW FHPMFLDDGK 180
  181 FNTTFYPEQV SYPQMIDIVT KYNPEVVWSD GEWDKSDDYW KAKEFLAWLY NSSPVKDQVV 240
  241 VNDRWGTGTM GKHGGFMTYS DHYDPGKLLE KKWENCMTLD KHSWGNRRDM KASEVNTAYE 300
  301 IIEQLARTIA CNGNLLLNVG PNMHGQIPAI FEDRLEEIGR FVNITSEAIF GTRPWIHQND 360
  361 TSASNVWYTS KYSSGKKPLK NLYQNVYNFQ LEEHTIVYAW ILDTSHEQFE LKSVKTTKNT 420
  421 TATILGTDVV LTGFEESDSM IILSSKIDWK KLPRRDIIVL KIEKAASYLR NPLMSTNEHH 480
  481 VQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 1hl8A
Description: CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA ALPHA-FUCOSIDASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 6.26329339735894 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 5.92180849080637 bayes_pls_golite062009
hydrolase activity 3.98075336331567 bayes_pls_golite062009
hexosaminidase activity 3.21852337137039 bayes_pls_golite062009
beta-N-acetylhexosaminidase activity 2.69072465526737 bayes_pls_golite062009
hyalurononglucosaminidase activity 2.33846657668199 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
glucosidase activity 1.85545420386612 bayes_pls_golite062009
galactosidase activity 1.26155841119987 bayes_pls_golite062009
sugar binding 1.05517664149942 bayes_pls_golite062009
alpha-glucosidase activity 1.00973231642658 bayes_pls_golite062009
beta-glucuronidase activity 0.55376725638834 bayes_pls_golite062009
mannosidase activity 0.48536369022293 bayes_pls_golite062009
carbohydrate binding 0.36193860645628 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
binding 0.129334455670168 bayes_pls_golite062009
beta-galactosidase activity 0.0137149865738109 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle