| Protein: | gi|6782249, gi|4... |
| Organism: | Arabidopsis thaliana |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6782249, gi|4....
| Description | E-value | Query Range |
Subject Range |
|
|
431.0 | [0..1] | [514..1] |
|
|
309.0 | [0..24] | [496..2] |
|
|
308.0 | [0..70] | [480..14] |
|
|
305.0 | [0..118] | [509..13] |
|
|
295.0 | [0..133] | [509..67] |
|
|
292.0 | [0..10] | [497..3] |
|
|
291.0 | [0..128] | [508..19] |
|
|
288.0 | [0..132] | [508..32] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF 60
61 NPSSLSNNND RSFVHGCGVV DR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.342 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.342 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.329 | N/A | N/A | a.276.1 | Description not found. |
| View | Download | 0.313 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.297 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.295 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.295 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.287 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.285 | N/A | N/A | a.39.1 | EF-hand |
|
Region A: Residues: [83-161] |
1 11 21 31 41 51
| | | | | |
1 EEDAVVVRSP IFPSEIGLEI RGCFGDFDCY LLLLSLIQKL RSVRLSSIRV NFCRLFSFAM 60
61 SRKRKATMDM VVAPSNNGF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.865 | a.118.1 | ARM repeat |
| View | Download | 0.863 | a.118.1 | ARM repeat |
| View | Download | 0.847 | a.2.3 | Chaperone J-domain |
| View | Download | 0.847 | a.2.3 | Chaperone J-domain |
| View | Download | 0.818 | a.118.1 | ARM repeat |
| View | Download | 0.804 | a.118.1 | ARM repeat |
| View | Download | 0.762 | a.39.1 | EF-hand |
| View | Download | 0.757 | a.2.3 | Chaperone J-domain |
| View | Download | 0.733 | a.39.1 | EF-hand |
| View | Download | 0.662 | a.2.3 | Chaperone J-domain |
|
Region A: Residues: [162-286] |
1 11 21 31 41 51
| | | | | |
1 TSSGFTNIPS SPCQTPRKGG RVNIKSKAKG NKSTPQTPIS TNAVRSFYEI SFMSRVTSLL 60
61 TKKFVNLIKQ AKDGMLDLNK AAETLEVQKR RIYDITNVLE GIDLIEKPFK NRILWKGVDA 120
121 CPGDE
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [287-381] |
1 11 21 31 41 51
| | | | | |
1 DADVSVLQLQ AEIENLALEE QALDNQIRWL FVTEEDIKSL PGFQNQTLIA VKAPHGTTLE 60
61 VPDPDEAADH PQRRYRIILR STMGPIDVYL VSEFE
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2azeB |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [382-514] |
1 11 21 31 41 51
| | | | | |
1 GKFEDTNGSG AAPPACLPIA SSSGSTGHHD IEALTVDNPE TAIVSHDHPH PQPGDTSDLN 60
61 YLQEQVGGML KITPSDVEND ESDYWLLSNA EISMTDIWKT DSGIDWDYGI ADVSTPPPGM 120
121 GEIAPTAVDS TPR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.483 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.372 | N/A | N/A | c.57.1 | Molybdenum cofactor biosynthesis proteins |
| View | Download | 0.371 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.322 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.309 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
