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View Structure Prediction Details

Protein: FPGS3_ARATH
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FPGS3_ARATH.

Description E-value Query
Range
Subject
Range
gi|15292867, gi|... - gi|30694286|ref|NP_851018.1| ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D); tetrahydrofolylpolyglutamate s...
344.0 [0..1] [492..1]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEDDGELS ARYQNTLDAL SSLITKRGRL ASNNQSHRFR LLFHYLKVLE LEDAVSQMKI  60
   61 IHVAGTKGKG STCTFAESIL RCYGLRTGLF TSPHLIDVRE RFRLNGIEIS QEKFVNYFWC 120
  121 CFHKLKEKTS NEVPMPTYFC FLALLAFKIF TTEQVDVVIL EVGLGGRFDA TNVIQKPVVC 180
  181 GISSLGYDHM EILGYTLAEI AAEKAGIFKS GVPAFTVAQP DEAMRVLNEK ASKLEVNLQV 240
  241 VEPLDSSQRL GLQGEHQYLN AGLAVALCST FLKEIGIEDK NGLDQTNGLP EKFISGLSNA 300
  301 YLMGRAMIVP DSELPEEIVY YLDGAHSPES MEACAIWFSK QIKQNQERNQ KRSEQILLFN 360
  361 CMSVRDPSLL LPRLRSKCID QGVDFKRAVF VPNVSVYNQV GSSTNVGTRV ESMSWQFGLQ 420
  421 RIWESLARGE AKSNSKSDSK GKEEEKSFVF SSLPVAVDWL RDNARQSKQV RFQVLVTGSL 480
  481 HLVGDLLRFI KK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.69897
Match: 1o5zA
Description: Crystal structure of Folylpolyglutamate synthase (TM0166) from Thermotoga maritima at 2.10 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acid-amino acid ligase activity 4.03401034724886 bayes_pls_golite062009
tetrahydrofolylpolyglutamate synthase activity 3.94486215528378 bayes_pls_golite062009
ligase activity 3.80574681739772 bayes_pls_golite062009
catalytic activity 2.66037860982128 bayes_pls_golite062009
dihydrofolate synthase activity 2.50201834836027 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 1.96801058335544 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle