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View Structure Prediction Details

Protein: gi|3608149, gi|1...
Organism: Arabidopsis thaliana
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3608149, gi|1....

Description E-value Query
Range
Subject
Range
KPRS1_ARATH - Ribose-phosphate pyrophosphokinase 1, chloroplastic OS=Arabidopsis thaliana GN=PRS1 PE=2 SV=2
422.0 [0..1] [352..52]

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Predicted Domain #1
Region A:
Residues: [1-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESLNVGNG NPSIPIINER TLPKFLESAR MEKSVNRTNT RLKLFSGTAN PALAQEIAWY  60
   61 MGLDLGKVNI KRFADGEIYV QLQESVRGCD VYLVQPTCTP TNENLMELLI MVDACRRASA 120
  121 KKVTAVIPYF GYARADRKTQ GRESIAAKLV ANLITEAGAD RVLACDLHSG QSMGYFDIPV 180
  181 DHVYCQPVIL DYLASKSIPS EDLVVVSPDV GGVARARAFA KKLSDAPLAI VDKRRSGHNV 240
  241 AEVMNLIGDV RGKVAIMVDD MIDTAGTIVK GAALLHQEGA REVYACCTHA VFSPPAIERL 300
  301 SGGLLQEVIV TNTLPVAEKN YFPQLTILSV ANLLGETIWR VHDDSSVSSI FL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 1dkrA
Description: Phosphoribosylpyrophosphate synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
adenine phosphoribosyltransferase activity 4.07252508868782 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 3.91023158228049 bayes_pls_golite062009
hypoxanthine phosphoribosyltransferase activity 3.89356447922614 bayes_pls_golite062009
uracil phosphoribosyltransferase activity 3.0470646511978 bayes_pls_golite062009
transferase activity 2.73727660668741 bayes_pls_golite062009
nucleobase binding 2.70671399975507 bayes_pls_golite062009
purine binding 2.63033967717893 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 2.53679639481311 bayes_pls_golite062009
catalytic activity 2.30431811394775 bayes_pls_golite062009
orotate phosphoribosyltransferase activity 2.02298774328915 bayes_pls_golite062009
amidophosphoribosyltransferase activity 1.6596316647688 bayes_pls_golite062009
ribose phosphate diphosphokinase activity 1.51875493459374 bayes_pls_golite062009
diphosphotransferase activity 0.749909396904601 bayes_pls_golite062009
binding 0.656467565014233 bayes_pls_golite062009
transcription regulator activity 0.499710217109617 bayes_pls_golite062009
nucleic acid binding 0.489833405048501 bayes_pls_golite062009
DNA binding 0.263777463202573 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle