| Protein: | VP52A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 707 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VP52A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
473.0 | [0..1] | [707..1] |
|
Region A: Residues: [1-362] |
1 11 21 31 41 51
| | | | | |
1 MSDISIDALG QTMGDFSNHE KLGFDLGAFV GDLAFEEDSG SEDISLEGLQ QELEECESDE 60
61 VVANILSSGD KLREYAKGVE NNLRKVELDS IEDYIKESDN LVSLHDQIRD CDSILSQMET 120
121 LLSGFQEEIG SISSDIKILQ EKSMDMGLRL KNRRVAESKL AKFVEDIIVP PKMIDVIVDG 180
181 EVNEEYMKTL EILSKKLKFV EADQAVKSSK ALKDVEPELE KLRQKAISKV YDFIVQKLIA 240
241 LRKPKTNIQI LQQSVLLKYK YIISFLKEHG KEVFMDVRAA YIDTMNKVLS AHFRAYIQAL 300
301 EKLQLDIATA YDLIGVETRT TGLFSRAREP LKNRSAVFAL GDRIKIIKDI DQPALIPHIA 360
361 EA
|
| Detection Method: |  |
| Confidence: | 11.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-707] |
1 11 21 31 41 51
| | | | | |
1 SSLKYPYEVL FRSLHKLLMD TATSEYMFCD DFFGEESIFY EIFAGPFSVI DEHFNPVLSN 60
61 CFDAIGLMLM IRIIHHHQLI MSRRRIPCLD SYLDKVNISL WPRFKMVFDS HLSSLRDANI 120
121 KTLWEDDVHP HYVMRRYAEF TASFIHLNVE YGDGQLDINL ERLRMAVDGL ILKLAKLFPR 180
181 PKQQIVFLIN NYDMTIAVLK EAGPEGGKIQ MHFEEMLKSN TSLFVEELLV EHFSDLIKFV 240
241 KNRASEDSSL NPERSITIAE VEPLVKDFGS RWKTAIELMD KDIITSFSNF LCGMDILRAA 300
301 LTQLLLYYTR LTDCIKKIDG GSALNRDLVS IQSIMYEIRK YSKTF
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 2pftA |
| Description: | No description for 2pftA was found. |
