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View Structure Prediction Details

Protein: HIS5B_ARATH
Organism: Arabidopsis thaliana
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIS5B_ARATH.

Description E-value Query
Range
Subject
Range
HIS7B_ARATH, HI7... - Probable imidazoleglycerol-phosphate dehydratase 2 OS=Arabidopsis thaliana GN=At4g14910 PE=2 SV=1, (...
437.0 [0..1] [272..1]

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Predicted Domain #1
Region A:
Residues: [1-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLSSSPAQ LLRPNLSSRA LLPPRTSIAS SHPPPPRFLV MNSQSQHRPS ISCASPPPGD  60
   61 NGFPAITTAS PIESARIGEV KRETKETNVS VKINLDGHGV SDSSTGIPFL DHMLDQLASH 120
  121 GLFDVHVRAT GDTHIDDHHT NEDVALAIGT ALLKALGERK GINRFGDFTA PLDEALIHVS 180
  181 LDLSGRPYLG YNLEIPTQRV GTYDTQLVEH FFQSLVNTSG MTLHIRQLAG KNSHHIIEAT 240
  241 FKAFARALRQ ATESDPRRGG TIPSSKGVLS RS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.69897
Match: 2f1dA
Description: X-Ray Structure of imidazoleglycerol-phosphate dehydratase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
imidazoleglycerol-phosphate dehydratase activity 1.6337728630325 bayes_pls_golite062009
catalytic activity 0.878454819018611 bayes_pls_golite062009
nucleic acid binding 0.369771518688522 bayes_pls_golite062009
structural constituent of ribosome 0.325699575011026 bayes_pls_golite062009
transcription regulator activity 0.212099606954236 bayes_pls_golite062009
structural molecule activity 2.19428886088058E-4 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle