| Protein: | SUGP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUGP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..27] | [433..417] |
|
|
214.0 | [0..27] | [433..418] |
|
|
210.0 | [0..1] | [443..653] |
|
|
208.0 | [0..27] | [433..418] |
|
|
205.0 | [0..27] | [433..418] |
|
|
205.0 | [0..27] | [433..418] |
|
|
204.0 | [0..27] | [433..418] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MDKGAPPSIF VNDGSFMERF RQLQQEKDKD KDKVVQVEDS KPVKIISNPK PAANKISIGL 60
61 KPNDAQKKGG KLAFSLKQKS KLLAPPVKLG TEEDEDDEDV KHEQGFGSVK RQKLEQRDTP 120
121 VKSAKVSDVA P
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [132-213] |
1 11 21 31 41 51
| | | | | |
1 PPPSDPTVKK VADKLASFVA KHGRPFEHIT RQKNPGDTPF KFLFDENCAD YKYYVFRLAE 60
61 EEKLISQTKD SGVLHSGDAG SR
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1x4oA |
| Description: | Solution structure of SURP domain in splicing factor 4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [214-293] |
1 11 21 31 41 51
| | | | | |
1 TSTAAIPLQK PAYQQTGYQI PASALYDTPV EPGASSRSAQ ASITRPSDSD SFSGPRGADP 60
61 LSMMEFYMKK AAQEEKMRRP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.493 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.423 | a.243.1 | Description not found. |
| View | Download | 0.402 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.391 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.391 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.332 | a.28.1 | ACP-like |
| View | Download | 0.332 | a.28.1 | ACP-like |
| View | Download | 0.325 | a.159.2 | FF domain |
| View | Download | 0.264 | a.7.7 | BAG domain |
|
Region A: Residues: [294-443] |
1 11 21 31 41 51
| | | | | |
1 RQSKDEMPPP ASLQGPSETS STDPGKRGHH MGDYIPLEEL DKFLSKCNDA AAQKATKEAA 60
61 EKAKIQADNV GHKLLSKMGW KEGEGIGSSR KGMADPIMAG DVKTNNLGVG ASAPGEVKPE 120
121 DDIYEQYKKR MMLGYKHRPN PLGNPRKAYY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
