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View Structure Prediction Details

Protein: gi|17065486, gi|...
Organism: Arabidopsis thaliana
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17065486, gi|....

Description E-value Query
Range
Subject
Range
gi|21553632, gi|... - gi|50058859|gb|AAT69174.1| hypothetical protein At2g24440 [Arabidopsis thaliana], gi|4337201|gb|AAD1...
177.0 [0..7] [186..5]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKKSKADG EEKAKPLTTL ASSRVTRSMD SRTRSQTQQN GAKAAGSATK PATKKAKRKN  60
   61 SAIETGRAKK GKKEEEVEEP EEAVEEEVEK EEPEVEDPT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTKIVIEHCK QCNAFKTRAI QVKEALEGAV PGVTVSLNPE KPRRGCFEIR EEGGQTFISL  60
   61 LEMKRPFAPM KALDMEEVIE DIIKKVK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.23
Match: 2ojlA
Description: No description for 2ojlA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle