YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|17065486, gi|...
Organism: Arabidopsis thaliana
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17065486, gi|....

Description E-value Query
Range
Subject
Range
gi|21553632, gi|... - gi|50058859|gb|AAT69174.1| hypothetical protein At2g24440 [Arabidopsis thaliana], gi|4337201|gb|AAD1...
177.0 [0..7] [186..5]

Back

Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKKSKADG EEKAKPLTTL ASSRVTRSMD SRTRSQTQQN GAKAAGSATK PATKKAKRKN  60
   61 SAIETGRAKK GKKEEEVEEP EEAVEEEVEK EEPEVEDPT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTKIVIEHCK QCNAFKTRAI QVKEALEGAV PGVTVSLNPE KPRRGCFEIR EEGGQTFISL  60
   61 LEMKRPFAPM KALDMEEVIE DIIKKVK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.23
Match: 2ojlA
Description: No description for 2ojlA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle