| Protein: | CMTA3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1032 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CMTA3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
735.0 | [0..1] | [1032..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF 60
61 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGQDNE NFQRRSYWLL 120
121 QEELSHIVFV HYLEV
|
| Detection Method: |  |
| Confidence: | 88.420216 |
| Match: | PF03859.7 |
| Description: | No description for PF03859.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-396] |
1 11 21 31 41 51
| | | | | |
1 KGSRVSTSFN RMQRTEDAAR SPQETGDALT SEHDGYASCS FNQNDHSNHS QTTDSASVNG 60
61 FHSPELEDAE SAYNQHGSST AYSHQELQQP ATGGNLTGFD PYYQISLTPR DSYQKELRTI 120
121 PVTDSSIMVD KSKTINSPGV TNGLKNRKSI DSQTWEEILG NCGSGVEALP LQPNSEHEVL 180
181 DQILESSFTM QDFASLQESM VKSQNQELNS GLTSDRTVWF QGQDMELNAI SNLASNEKAP 240
241 YLSTMKQHLL HGALGEEGLK K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [397-768] |
1 11 21 31 41 51
| | | | | |
1 MDSFNRWMSK ELGDVGVIAD ANESFTQSSS RTYWEEVESE DGSNGHNSRR DMDGYVMSPS 60
61 LSKEQLFSIN DFSPSWAYVG CEVVVFVTGK FLKTREETEI GEWSCMFGQT EVPADVISNG 120
121 ILQCVAPMHE AGRVPFYVTC SNRLACSEVR EFEYKVAESQ VFDREADDES TIDILEARFV 180
181 KLLCSKSENT SPVSGNDSDL SQLSEKISLL LFENDDQLDQ MLMNEISQEN MKNNLLQEFL 240
241 KESLHSWLLQ KIAEGGKGPS VLDEGGQGVL HFAASLGYNW ALEPTIIAGV SVDFRDVNGW 300
301 TALHWAAFFG RERIIGSLIA LGAAPGTLTD PNPDFPSGST PSDLAYANGH KGIAGYLSEY 360
361 ALRAHVSLLS LN
|
| Detection Method: | |
| Confidence: | 68.30103 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [769-1032] |
1 11 21 31 41 51
| | | | | |
1 DKNAETVEMA PSPSSSSLTD SLTAVRNATQ AAARIHQVFR AQSFQKKQLK EFGDKKLGMS 60
61 EERALSMLAP KTHKSGRAHS DDSVQAAAIR IQNKFRGYKG RKDYLITRQR IIKIQAHVRG 120
121 YQFRKNYRKI IWSVGVLEKV ILRWRRKGAG LRGFKSEALV EKMQDGTEKE EDDDFFKQGR 180
181 KQTEDRLQKA LARVKSMVQY PEARDQYRRL LNVVNDIQES KVEKALENSE ATCFDDDDDL 240
241 IDIEALLEDD DTLMLPMSSS LWTS
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
