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View Structure Prediction Details

Protein: gi|14423484, gi|...
Organism: Arabidopsis thaliana
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14423484, gi|....

Description E-value Query
Range
Subject
Range
gi|21536670 - gi|21536670|gb|AAM61002.1| unknown [Arabidopsis thaliana]
388.0 [0..1] [247..1]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVILSASSTV RAALDTQPRL PYNPNAPRKV KKIPNGNSFL PPPSPAPSPG ISISVADLLK  60
   61 RPSSKEITVD VDDTYMGYET WSPSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKLEKPRSVF NPASLAFIGD SIYELYARRH FLFPPLSIED YNDRVRAVVR CEAQYALLNK  60
   61 LVDDDFLTKE ERDILRWGKN LGSARTRTRR RAGNAVYNKA SSLETLIGYL YLTNGKRLEK 120
  121 IMEKLGFSSD SSTEIVIEET NPKPSESSNL PNFILNEQVV SF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.0
Match: 1u61A
Description: X-ray crystal structure of conserved hypothetical protein from Bacillus cereus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.586992806283081 bayes_pls_golite062009
hydrolase activity 0.16401529741579 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.00837845982391983 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle