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View Structure Prediction Details

Protein: gi|54291559, gi|...
Organism: Oryza sativa Japonica Group
Length: 746 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54291559, gi|....

Description E-value Query
Range
Subject
Range
gi|149747780, gi... - gi|153838800|ref|ZP_01991467.1| protease 2 [Vibrio parahaemolyticus AQ3810], gi|149747780|gb|EDM5867...
gi|28808305, gi|... - gi|28900022|ref|NP_799677.1| putative protease [Vibrio parahaemolyticus RIMD 2210633], gi|28808305|d...
gi|28808305 - gi|28808305|dbj|BAC61510.1| putative protease [Vibrio parahaemolyticus RIMD 2210633]
459.0 [0..1] [739..1]

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Predicted Domain #1
Region A:
Residues: [1-746]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLGRIAIQL HASAPLLFSR RATATALVLP HSRRAAFAMA ATPPVARKVP RELAQHGDVR  60
   61 VDNYYWLRDD SRSHPDVLAH LRAENLYTAT IMSDVKNLED EIYAEIRARI KEDDIGAPLR 120
  121 KGQYYYYNRT LTGKEYVQHC RRLVPTDAPV TVYDVMPTGP NAPHEHIILD ENVKAEGHDY 180
  181 YSIGAFKVSP NGKLVAYAQD TKGDEIYTVY VIDAESGKFV GQPLEGITSD IEWAGDDHLV 240
  241 YITMDTILRP DKVWLHMLES NQSDDICLYH EKDDMFSLGL QTSESKQYLF VESGSKNTSF 300
  301 IFYLDISKQS KELVVLTPCV YGIDTTASHR GNHFYIKRRS EEFYNSELIA CPLDNVAETT 360
  361 VLLPHRESVK IQSFQLFENH IAVYERQNGL PKVTAYRLPA TGEPIGQLQG GREIDFVDPA 420
  421 YDVEPEQSQF GSSVVRFHYS SMRTPPSVFD YDMDSGVSVL KKIDTVLGGF DASNYVTERK 480
  481 WAAASDGTQI PMTILYRKDR VNLDGSDPML LYGYGSYEIC IDPSFGRSRF SLVDRGFIYV 540
  541 IAHIRGGGEM GRKWYEDGKL LNKRNTFTDF IACAEHLIEN KYCSKEKLCI NGRSAGGLLM 600
  601 GAVLNMRPDL FKAAVAGVPF VDVLTTMLDP TIPLTTSEWE EWGDPRKEEY YYYMKSYSPV 660
  661 DNLKAQGYPN ILVTAGLNDP RVMYSEPAKY VAKLRELKTD DNLLLFKCEL GAGHFSKSGR 720
  721 FEKLREDAFT YAFILKALGM APKAAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.221849
Match: 1e5tA
Description: Prolyl oligopeptidase, N-terminal domain; Prolyl oligopeptidase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.65329406211558 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
peptidase activity 0.961519510535888 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.667074468681133 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.560001331598537 bayes_pls_golite062009
binding 0.284995999425341 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle