| Protein: | PHT44_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHT44_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
281.0 | [0..130] | [591..123] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MAMGAVLSSR TFASPLSSSG KQHPPQNNKC TCSSPPTRDK FSRLTTRTTI FQVSNYSRST 60
61 SMERFQLSAR FHQPVVDSST NYLTRWFYNA NLKRRRIECF LTSDPINTGW LKPRRWDNFT 120
121 SLDTACVQPD YKIPVRTRAD CKAEQYEITG SPLSPSDVPA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [161-591] |
1 11 21 31 41 51
| | | | | |
1 EAVLIGDTNE ISPWWQQFPK RWTVVLLCFF SFLLCNMDRV NMSIAILPMS SEFGWSPATV 60
61 GLIQSSFFWG YLLTQILGGI WADRFGGKVV LGFGVVWWSI ATVLTPLAAK IGLPFLLVMR 120
121 AFMGIGEGVA MPAMNNILSK WVPVSERSRS LALVYSGMYL GSVTGLAFSP LLISRFGWPS 180
181 VFYAFGSLGS VWFALWQRKA HSSPSEDPEL SKAEKRYILG GSTLKEPVTS IPWKLILSKP 240
241 PVWALIVSHF CHNWGTFILL TWMPTYYNQV LKFNLTESGL LCVLPWLTMA IFANIGGWIA 300
301 DTLVGRGVSI TNVRKIMQSI GFLGPALFLT LLSKVRTPAM AVLCMACSQG SDAFSQSGLY 360
361 SNHQDIGPRY AGVLLGLSNT AGVLAGVFGT AATGYILQKG SWDSVFQVAV VLYIVGTVVW 420
421 NVFSTGEKVL E
|
| Detection Method: | |
| Confidence: | 55.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.46247398538901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.58978526526921 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.31967711223954 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.94605227012838 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 2.62141276633776 | bayes_pls_golite062009 |
| sugar transmembrane transporter activity | 2.47557586092261 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 2.33121027955345 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 2.32839532867295 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 2.32839532867295 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 2.10485633822652 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 1.78662033436109 | bayes_pls_golite062009 |
| monosaccharide transmembrane transporter activity | 1.6904339767429 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.805286077372817 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
