| Protein: | TBCB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 243 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBCB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..1] | [243..1] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MATSRLQLEG DDSVHLHITH ANLKSFSADA RFSPQMSVEA VKEKLWKKCG TSVNSMALEL 60
61 YDDSGSKVAV LSDDSRPLGF FSPFDGFRLH IIDLDPSSVT TGGWLEDTSL VEKYNISEED 120
121 YAKRTDSFRK FKEKRVSQNP VAAEAK
|
| Detection Method: |  |
| Confidence: | 17.69897 |
| Match: | 1t0yA |
| Description: | Solution Structure of a Ubiquitin-Like Domain from Tubulin-binding Cofactor B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.19381585790185 | bayes_pls_golite062009 |
| protein binding | 1.17197911794381 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.599634454232833 | bayes_pls_golite062009 |
| structural molecule activity | 0.576819726104993 | bayes_pls_golite062009 |
| nucleic acid binding | 0.383121378043805 | bayes_pls_golite062009 |
| DNA binding | 0.0840213088061073 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0485636215870291 | bayes_pls_golite062009 |
|
Region A: Residues: [147-243] |
1 11 21 31 41 51
| | | | | |
1 TKENYMEDLC ANIKVGDRCQ VEPGEKRGMV KYVGRAESLG PGYWVGIQYD EPLGKHDGMV 60
61 KGTRFFECPR LQGGMVRPDK VKVGDYPERD PFEEDEI
|
| Detection Method: | |
| Confidence: | 30.30103 |
| Match: | 1whgA |
| Description: | Solution structure of the CAP-Gly domain in mouse tubulin specific chaperone B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| tubulin binding | 2.81573953488242 | bayes_pls_golite062009 |
| microtubule binding | 2.67824962486294 | bayes_pls_golite062009 |
| binding | 2.07863891614262 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.95334135428526 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.16043967945651 | bayes_pls_golite062009 |
| protein binding | 0.896264971703612 | bayes_pls_golite062009 |
| nucleic acid binding | 0.625661567957308 | bayes_pls_golite062009 |
| DNA binding | 0.336599045092266 | bayes_pls_golite062009 |
| transcription regulator activity | 0.292990934444865 | bayes_pls_golite062009 |
| catalytic activity | 0.069855517589921 | bayes_pls_golite062009 |
