| Protein: | ORTH5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 623 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORTH5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..1] | [588..1] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MAIQTQLPCD GDGVCMRCQV NPPSEETLTC GTCVTPWHVS CLLPESLASS TGDWECPDCS 60
61 GVVVPSAAPG TGISGPESSG SVLVTAIRAI QADVTLTEAE KA
|
| Detection Method: |  |
| Confidence: | 3.3 |
| Match: | 2e6rA |
| Description: | No description for 2e6rA was found. |
|
Region A: Residues: [103-244] |
1 11 21 31 41 51
| | | | | |
1 KKRQRLMSGG GDDGVDDEEK KKLEIFCSIC IQLPERPVTT PCGHNFCLKC FEKWAVGQGK 60
61 LTCMICRSKI PRHVAKNPRI NLALVSAIRL ANVTKCSGEA TAAKVHHIIR NQDRPDKAFT 120
121 TERAVKTGKA NAASGKFFVT IP
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
|
Region A: Residues: [245-469] |
1 11 21 31 41 51
| | | | | |
1 RDHFGPIPAA NDVTRNQGVL VGESWEDRQE CRQWGVHFPH VAGIAGQAAV GAQSVALSGG 60
61 YDDDEDHGEW FLYTGSGGRD LSGNKRVNKI QSSDQAFKNM NEALRLSCKM GYPVRVVRSW 120
121 KEKRSAYAPA EGVRYDGVYR IEKCWSNVGV QGLHKMCRYL FVRCDNEPAP WTSDEHGDRP 180
181 RPLPDVPELE NATDLFVRKE SPSWGFDEAE GRWKWMKSPP VSRMA
|
| Detection Method: | |
| Confidence: | 74.39794 |
| Match: | PF02182.8 |
| Description: | No description for PF02182.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [470-623] |
1 11 21 31 41 51
| | | | | |
1 LDTEERKKNK RAKKGNNAMK ARLLKEFSCQ ICRKVLSLPV TTPCAHNFCK ACLEAKFAGI 60
61 TQLRDRSNGV RKLRAKKNIM TCPCCTTDLS EFLQNPQVNR EMMEIIENFK KSEEEAEVAE 120
121 SSNISEEEGE EESEPPTKKI KMDKNSVGGT SLSA
|
| Detection Method: | |
| Confidence: | 17.0 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
