| Protein: | gi|42568781, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 205 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42568781, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
203.0 | [0..8] | [205..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MCRKSEAMGR RRVEIKRIEN KSSRQVTFCK RRNGLMEKAR QLSILCGSSV ALFIVSSTGK 60
61 LYNSSSGDSM AKIISRFKIQ
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.0368771990474 | bayes_pls_golite062009 |
|
Region A: Residues: [81-205] |
1 11 21 31 41 51
| | | | | |
1 QADDPETLDL EDKTQDYLSH KELLEIVQRK IEEAKGDNVS IESLISMEEQ LKSALSVIRA 60
61 RKTELLMELV KNLQDKEKLL KEKNKVLASE VGKLKKILET GDERAVMSPE NSSGHSPPET 120
121 LPLLK
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | PF01486.8 |
| Description: | No description for PF01486.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.969 | N/A | N/A | a.7.7 | BAG domain |
