| Protein: | gi|29367553, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 276 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29367553, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
195.0 | [0..5] | [264..16] |
|
Region A: Residues: [1-276] |
1 11 21 31 41 51
| | | | | |
1 MAFRLSNSLL GILNAVTFLL SVPVLGGGIW LATRADGTEC ERYFSAPVIA FGVFLLLVSL 60
61 AGLVGACCRV NCLLWFYLVA MFVLIVVLFC FTVFAFVVTN KGAGEAVSGR GYKEYRLGDY 120
121 SNWLQKRMEN SKNWNRIRSC LQDSKVCKKL QDKNWDRTQF FKADLSPLES GCCKPPSSCN 180
181 FLYVSGTNWT KVPTNSSDPD CNTWVDDGTQ LCYNCQSCKA GAVATLKRDW KRVAVVCIVF 240
241 LVFIVIVYSL GCCAFRNNRR DNRGAYRGAA WKGGYA
|
| Detection Method: |  |
| Confidence: | 1.27 |
| Match: | 1oedE |
| Description: | Acetylcholine receptor protein, gamma chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 0.490530350426558 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.470369925890019 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.296558094949252 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.270278407554454 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.236415535327918 | bayes_pls_golite062009 |
| channel activity | 0.219732635042021 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.219732635042021 | bayes_pls_golite062009 |
| binding | 0.136398313410002 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0891259397854478 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0809952490788071 | bayes_pls_golite062009 |
| ion channel activity | 0.0676313321342619 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.00152349218944181 | bayes_pls_golite062009 |
