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View Structure Prediction Details

Protein: gi|115446499, gi...
Organism: Oryza sativa Japonica Group
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115446499, gi....

Description E-value Query
Range
Subject
Range
gi|92867677 - gi|92867677|gb|ABE77860.1| SOUL heme-binding protein; Bacterial regulatory factor, effector [Medicag...
304.0 [0..35] [284..47]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLCSASAR PPLAAGARGR RPARGAARVI GGGGGAEARA SLVLALAAQA LAASQRRAAG  60
   61 LAAEAVKYAF PPRRFEPRTL EEALMSVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLETVPFRVL KREAEYEIRE VESYYVAETT MPGRSGFDFN GSSQSFNVLA SYLFGKNTTS  60
   61 EQMEMTTPVF TRKGEPDGEK MDMTTPVITK KSANENKWKM SFVMPSKYGP DLPLPKDPSV 120
  121 TIKEVPAKIV AVAAFSGLVT DDDISQRESR LRETLQKDSQ FRVKDDSVVE IAQYNPPFTL 180
  181 PFTRRNEIAL EVKRLDANF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.39794
Match: 2hvaA
Description: No description for 2hvaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle