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View Structure Prediction Details

Protein: gi|115446499, gi...
Organism: Oryza sativa Japonica Group
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115446499, gi....

Description E-value Query
Range
Subject
Range
gi|92867677 - gi|92867677|gb|ABE77860.1| SOUL heme-binding protein; Bacterial regulatory factor, effector [Medicag...
304.0 [0..35] [284..47]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLCSASAR PPLAAGARGR RPARGAARVI GGGGGAEARA SLVLALAAQA LAASQRRAAG  60
   61 LAAEAVKYAF PPRRFEPRTL EEALMSVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLETVPFRVL KREAEYEIRE VESYYVAETT MPGRSGFDFN GSSQSFNVLA SYLFGKNTTS  60
   61 EQMEMTTPVF TRKGEPDGEK MDMTTPVITK KSANENKWKM SFVMPSKYGP DLPLPKDPSV 120
  121 TIKEVPAKIV AVAAFSGLVT DDDISQRESR LRETLQKDSQ FRVKDDSVVE IAQYNPPFTL 180
  181 PFTRRNEIAL EVKRLDANF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.39794
Match: 2hvaA
Description: No description for 2hvaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle