| Protein: | PUB04_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 728 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for PUB04_ORYSJ.
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Region A: Residues: [1-337] |
1 11 21 31 41 51
| | | | | |
1 MAAAASASSP VEFLLRRPAP RRRRLPLAGA FFAPTGLAGA TLLRAVASLA ASLVAGARPP 60
61 SQRRNVDALA RRLALLSAIL ESILLDTAAA GAFSDAANLC FRELYVVLFR AELLVSYVAS 120
121 AGRAWALLRS PHLAASFRDL DAELAVVLDV LPAASLRLSH DATGLLDLLR AHCRCRAPAQ 180
181 YHDPDEAALR ERLMDALRQF DLGQPPDHPS LQSLLADMGI STAASCRAEI DYLEEQILSQ 240
241 EEDTDLPLVG SVLALLRYCL FAVFDPSNAK ALRDWPLSGN RQRLLSIGGG DDTSFSVPKE 300
301 FSCPISLDLM RDPVVASTGQ TYDRPSIIQW IEEGHST
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| Detection Method: |  |
| Confidence: | 23.0 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [338-728] |
1 11 21 31 41 51
| | | | | |
1 CPNSGQTLAD HRLVPNRALR SLISQWCGVY GLQYDSPESN EGMAECVAAS CSSRAAMEAN 60
61 KATARILVRM LEDGSENVKA VAAKEIRLLA KTGKQNRAFI ADLGAIPLLC RLLLSNDWMA 120
121 QENAVTALLN LSIFEPNKGR IMEQEGCLRL IVGVLQNGWT TEAKENAAAT LFSLSVVHNF 180
181 KKLIMNEPGA VEELASMLTK GTSRGKKDAV MALFNLSTHP ESSARMLESC AVVALIQSLR 240
241 NDTVSEEAAG ALALLMKQPS IVHLVGSSET VITSLVGLMR RGTPKGKENA VSALYEICRR 300
301 GGSALVQRVA KIPGLNTVIQ TITLNGTKRA KKKASLIVKM CQRSQMPSAM ALGSTLTVVD 360
361 RSLVGNNTLR RAASFGSGEL SNPISISVQV P
|
| Detection Method: | |
| Confidence: | 46.0 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
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