| Protein: | TYRA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYRA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
251.0 | [0..29] | [640..51] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MAETLITKPP LSLSFTSLSS MLPSLSLSTA NRHLSVTDTI PLPNSNSNAT PPLRIAIIGF 60
61 GNYGQFLAET LISQGHILFA HSRSDHSSAA RRLGVSYFTD LHDLCERHPD VVLLCTSILS 120
121 IENILKTLPF QRLRRNTLFV DVLSVKEFAK TLLLQYLPED FDILCTH
|
| Detection Method: |  |
| Confidence: | 42.30103 |
| Match: | 1psdA |
| Description: | Phosphoglycerate dehydrogenase; Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.16785883389468 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.95477050413 | bayes_pls_golite062009 |
| prephenate dehydrogenase activity | 1.03016160419952 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 0.771153340292 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.66554302844944 | bayes_pls_golite062009 |
|
Region A: Residues: [168-564] |
1 11 21 31 41 51
| | | | | |
1 PMFGPQSVSS NHGWRGLRFV YDKVRIGEER LRVSRCESFL EIFVREGCEM VEMSVTDHDK 60
61 FAAESQFITH TLGRLLGMLK LISTPINTKG YEALLDLAEN ICGDSFDLYY GLFVYNNNSL 120
121 EVLERIDLAF EALRKELFSR LHGVVRKQSF EGEAKKVHVF PNCGENDASL DMMRSEDVVV 180
181 KYEYNSQVSG SVNDGSRLKI GIVGFGNFGQ FLGKTMVKQG HTVLAYSRSD YTDEAAKLGV 240
241 SYFSDLDDLF EEHPEVIILC TSILSTEKVL ESLPFQRLKR STLFVDVLSV KEFPRNLFLQ 300
301 TLPQDFDILC THPMFGPESG KNGWNNLAFV FDKVRIGMDD RRKSRCNSFL DIFAREGCRM 360
361 VEMSCAEHDW HAAGSQFITH TVGRLLEKLS LESTPID
|
| Detection Method: | |
| Confidence: | 16.221849 |
| Match: | 1xwfA |
| Description: | K185N mutated S-adenosylhomocysteine hydrolase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.16785883389468 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.95477050413 | bayes_pls_golite062009 |
| prephenate dehydrogenase activity | 1.03016160419952 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 0.771153340292 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.66554302844944 | bayes_pls_golite062009 |
|
Region A: Residues: [565-640] |
1 11 21 31 41 51
| | | | | |
1 TKGYETLLKL VENTAGDSFD LYYGLFLYNP NAMEQLERFH VAFESLKTQL FGRLHSQHSH 60
61 ELAKSSSPKT TKLLTS
|
| Detection Method: | |
| Confidence: | 41.045757 |
| Match: | 2g5cA |
| Description: | Crystal Structure of Prephenate Dehydrogenase from Aquifex aeolicus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| prephenate dehydrogenase activity | 3.08309370139945 | bayes_pls_golite062009 |
| catalytic activity | 2.20335378247333 | bayes_pls_golite062009 |
| oxidoreductase activity | 2.187844467027 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.16905220290347 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.1572935216705 | bayes_pls_golite062009 |
| pyrroline-5-carboxylate reductase activity | 0.97274261484059 | bayes_pls_golite062009 |
