YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49259503, gi\|...
Organism:	Homo sapiens
Length:	253 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49259503, gi|....

Description	E-value	Query Range	Subject Range
gi\|26334371 - gi\|26334371\|dbj\|BAC30903.1\| unnamed protein product [Mus musculus]	412.0	[0..2]	[253..94]
gi\|68440069 - gi\|68440069\|ref\|XP_693938.1\| PREDICTED: similar to beta3-glucuronyltransferase [Danio rerio]	410.0	[0..2]	[253..216]
gi\|109109379 - gi\|109109379\|ref\|XP_001083698.1\| PREDICTED: similar to beta-1,3-glucuronyltransferase 1 [Macaca mula...	407.0	[0..2]	[253..83]
gi\|2217942, gi\|1... - gi\|2217942\|dbj\|BAA20551.1\| glycoprotein specific UDP-glucuronyltransferase [Rattus norvegicus], gi\|1...	407.0	[0..2]	[253..96]
B3GAT1 - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) gi\|124000261, gi... - gi\|124000261\|gb\|ABM87639.1\| beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) [synthetic ...	407.0	[0..2]	[253..83]
B3GA1_CANLF - Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 OS=Canis lupus familiaris GN=B3G...	407.0	[0..2]	[253..84]

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Predicted Domain #1

Region A:
Residues: [1-253]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALPTIHVVTP TYSRPVQKAE LTRMANTLLH VPNLHWLVVE DAPRRTPLTA RLLRDTGLNY  60
   61 THLHVETPRN YKLRGDARDP RIPRGTMQRN LALRWLRETF PRNSSQPGVV YFADDDNTYS 120
  121 LELFEEMRST RRVSVWPVAF VGGLRYEAPR VNGAGKVVRW KTVFDPHRPF AIDMAGFAVN 180
  181 LRLILQRSQA YFKLRGVKGG YQESSLLREL VTLNDLEPKA ANCTKILVWH TRTEKPVLVN 240
  241 EGKKGFTDPS VEI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	115.0
Match:	1v82A
Description:	Crystal structure of human GlcAT-P apo form
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.3567084433464	bayes_pls_golite062009
transferase activity	1.04375515050786	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: