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View Structure Prediction Details

Protein: gi|220953596, gi...
Organism: synthetic construct
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220953596, gi....

Description E-value Query
Range
Subject
Range
gi|54637915, gi|... - gi|54637915|gb|EAL27317.1| GA19016 [Drosophila pseudoobscura pseudoobscura], gi|125773843|ref|XP_001...
gi|194101796, gi... - gi|195143735|ref|XP_002012853.1| GL23707 [Drosophila persimilis], gi|194101796|gb|EDW23839.1| GL2370...
gi|54637915|gb|E... - GA19016-PA [Drosophila pseudoobscura], GA19016 [Drosophila pseudoobscura pseudoobscura]
309.0 [0..1] [313..1]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHWEDFYNT HLPPADFEDN RSLLKEFCER HNKLQNRIVL VTSGGTTVPL EHNTVRFVDN  60
   61 FSAGTRGSAS AEYFLDHDYA VIFMHRHKSL EPFTRHFTGQ QFFDMLDIAD NSQSSTIAIK 120
  121 PDSVDVFAPV LAKYKIARET QMILYVNFTS VVDYMWLLRA ACECLAAFEE RAVLYLAAAV 180
  181 SDFYIPEDMM PTHKMQSGDG APTISLQLVP KMLAPLASLW VPHAFVVSFK LETDESLLIV 240
  241 KARDSLNKYK HKLVIANVLQ TRKHRVVFVT PTDSYELHLT REQTLQGLEI EEPIVADVVQ 300
  301 KHGEFISNAQ QRQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.69897
Match: 1p9oA
Description: Crystal Structure of Phosphopantothenoylcysteine Synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphopantothenate--cysteine ligase activity 5.69075768451173 bayes_pls_golite062009
phosphopantothenoylcysteine decarboxylase activity 5.47152792211468 bayes_pls_golite062009
ligase activity 2.22669253992824 bayes_pls_golite062009
binding 1.89072001556053 bayes_pls_golite062009
acid-amino acid ligase activity 1.60765845284251 bayes_pls_golite062009
catalytic activity 1.32370671504792 bayes_pls_golite062009
carboxy-lyase activity 1.28899846789805 bayes_pls_golite062009
carbon-carbon lyase activity 0.53776941010038 bayes_pls_golite062009
protein binding 0.395135807048731 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.133284065682966 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle