| Protein: | gi|220960326, gi... |
| Organism: | synthetic construct |
| Length: | 370 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220960326, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..1] | [370..1] |
|
Region A: Residues: [1-370] |
1 11 21 31 41 51
| | | | | |
1 MDAPAEGHVD PESCNEIEDE KSGSDCQSMP AYMNSVMRRQ YLQQMVKMLP APVQNRIVFL 60
61 KNLQLQHLNI EAQFFEDVYK LEQKYQVQYQ PLFDKRREII EGKVDPAEEK PQWKEPESST 120
121 DNEADAEHFR EALSSLKSIP KDAKGIPGFW LTVFRNTAIM SEMVQPHDEP AIRKLIDISI 180
181 KYDNGHSYTL EFHFDKNEYF SNSVLTKQYV LKSTVDPNDP FAFEGPEIYK CTGCTINWEK 240
241 KMNLTVKTIR KKQKHKERGA VRTIVKQVPT DSFFNFFSPP EVPSDQEEVD DDSQQILATD 300
301 FEIGHFLRAR IIPKAVLYYT GDIVDDEDDE DEEEYDENEE DEYDDDDAPP PKGPKSAGIK 360
361 KQSPNDCPNQ
|
| Detection Method: |  |
| Confidence: | 62.69897 |
| Match: | 2ayuA |
| Description: | The structure of nucleosome assembly protein suggests a mechanism for histone binding and shuttling |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone binding | 4.83364158381373 | bayes_pls_golite062009 |
| binding | 2.67502047678266 | bayes_pls_golite062009 |
| nucleic acid binding | 2.19063722234765 | bayes_pls_golite062009 |
| DNA binding | 2.02361409111178 | bayes_pls_golite062009 |
| protein binding | 1.58681138679309 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.108342723404403 | bayes_pls_golite062009 |
