| Protein: | gi|220948718 |
| Organism: | synthetic construct |
| Length: | 416 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220948718.
| Description | E-value | Query Range |
Subject Range |
|
|
478.0 | [0..1] | [416..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MSFSNLLMKS GLTVAVRDAQ AAVLMTATRQ GHTIRGKPPG VARSLEQRIR EENVEDPEVV 60
61 ARINIGFPQL KESRSAQLKK RLEHLKSQRS DKQLEQLARS NKLIIDLDKV QRTYVKTTGQ 120
121 HD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [123-333] |
1 11 21 31 41 51
| | | | | |
1 LRLVADHYGI FEHLFGSAYF VPRVPLNISY QLDGDSLAPV YNGNVIKPTE AAKAPQIDFD 60
61 GLVDPITGQA AGQDTYWTLV ASNPDAHYTN GTAECLHWFI ANIPNGKVSE GQVLAEYLPP 120
121 FPPRGVGYQR MVFVLYKQQA RLDLGSYQLA AADYGNLEKR TFSTLDFYRQ HQEQLTPAGL 180
181 AFYQTNWDES LTQFYHDVLK IKEPVYEYDF P
|
| Detection Method: | |
| Confidence: | 48.221849 |
| Match: | 1bd9A |
| Description: | Phosphatidylethanolamine binding protein, PEBP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 5.60349471654541 | bayes_pls_golite062009 |
| structural molecule activity | 5.28498099874666 | bayes_pls_golite062009 |
| phosphatidylethanolamine binding | 2.39921319648948 | bayes_pls_golite062009 |
| binding | 1.8997510034028 | bayes_pls_golite062009 |
| phospholipid binding | 1.70781158126196 | bayes_pls_golite062009 |
| lipid binding | 1.58605438198908 | bayes_pls_golite062009 |
| protein binding | 1.4054795148286 | bayes_pls_golite062009 |
| receptor binding | 1.09518634969861 | bayes_pls_golite062009 |
| enzyme inhibitor activity | 0.10294346442997 | bayes_pls_golite062009 |
|
Region A: Residues: [334-416] |
1 11 21 31 41 51
| | | | | |
1 KPYLTDQKFF PLKQPFNLYM DKHRDQKQVN KEYLERKLAK THPFEGPKKP LRYPNAHPIR 60
61 DVPSWLRTEI RKERLGTGRV QDY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
