| Protein: | gi|220945962 |
| Organism: | synthetic construct |
| Length: | 850 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220945962.
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..348] | [850..34] |
|
Region A: Residues: [1-287] |
1 11 21 31 41 51
| | | | | |
1 MDTAGDMDHL ASVSFGDFET KSPEGDVSCY QNFRAQTEHV SLDISLGQKS DTLFAADQTP 60
61 TPTRLIKNCD EVGLFEDLQH VNPFDIGFQQ AAERNVSGTP SRPEARPNDG ESLHTPQVYP 120
121 VEAPTVVSVP SENQVPQSVS CGDMDVDQLL ATTVTSPSKA SQDGPPPLQL IQPQVLTWVL 180
181 PAQSVPISIA TVDCNRNRVK PTGAIHPFIL PKPTAKELNK TSKRPEPILV SCNPPNNEPS 240
241 SASLTPTSQL PIKERLKAII HSNNNRRSFS TPPKAAKAKD RSRDEDC
|
| Detection Method: |  |
| Confidence: | 3.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [288-611] |
1 11 21 31 41 51
| | | | | |
1 MERRRAAASR YRNKMRNEHK DLIKQNAQLQ QENQELHERI SRLEKELQQH RSHSSLAGGL 60
61 RRRPIQPPVM DPQSEQEYAF LAQMMEQYAR RRLQQQFDQQ LHEINLKMDR QRQLLEQERY 120
121 RQRQQELQVQ REAEEDYESN GNNLNQQYDQ YDNAEAEASY GSPMEAVSDL QSPPLYLPRL 180
181 PNLPPLPSLP NRPSLGNSPN RNSVLRERIP FAVGPSDARF FDNPNDPSGE LDSRALEDYE 240
241 EYAPIEPTTE VATTASKTKI DTPVPAPVPV EPPKLLDAAN TNFHRINPQS AAAAAVAGVN 300
301 IPQSKEQPPH ELNALINKLQ KQSK
|
| Detection Method: | |
| Confidence: | 16.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [612-767] |
1 11 21 31 41 51
| | | | | |
1 APSHLTLVNG GDSSQEQIVL RQHLGMNSEM GVYIVALIAG VSAAVTVGLL ALGVTWFHNR 60
61 HKAAADVEYP AYGVTGPNKD VSPSGDRKLA QSAQMYHYQH QKQQIIAMEN QATDGSCGMS 120
121 DVESDDDNEE GDYTVYECPG LAPTGEMEVK NPLFLD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [768-850] |
1 11 21 31 41 51
| | | | | |
1 ETPATPSNNL SSQTAGAANA AAATNNNITQ ATPQQPATLK KGTVKPNINL LNATGTAAAA 60
61 ASAASAASAT GGEEPKQKRK SKK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
