| Protein: | SLU7B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLU7B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
769.0 | [0..1] | [535..1] |
|
Region A: Residues: [1-67] |
1 11 21 31 41 51
| | | | | |
1 MATASVAFKS REDHRKKLEL EEARKAGLAP AEVDEDGKEI NPHIPEYMSK APWYLKSEQP 60
61 SLKHQKN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [68-126] |
1 11 21 31 41 51
| | | | | |
1 WKIEPEPKKI WYDRGKKIYQ AEQYRKGACI NCGAMTHSSK ACMDRPRKIG AKYTNMNIA
|
| Detection Method: | |
| Confidence: | 1.03 |
| Match: | 1a1tA |
| Description: | HIV nucleocapsid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [127-347] |
1 11 21 31 41 51
| | | | | |
1 ADEKIESFEL DYDGKRDRWN GYDTSTYRHV VDRYDAKEEA RKKYLKEQQL KKLEEKNNNE 60
61 NGDDATSDGE EDLDDLRVDE AKVDESRQMD FAKVEKRVRT TGGGSTGTVR NLRIREDTAK 120
121 YLLNLDVNSA HYDPKTRSMR EDPLPDADPN EKFYLGDNQY RNSGQALEFK QINIHSCEAF 180
181 DKGHDMHMQA APSQAELLYK NFKVAKEKLK TQTKDTIMEK Y
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [348-426] |
1 11 21 31 41 51
| | | | | |
1 GNAATEGEIP MELLLGQSER QIEYDRAGRI MKGQEVIIPK SKYEEDVHAN NHTSVWGSWW 60
61 KDHQWGYKCC QQTIRNSYC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [427-536] |
1 11 21 31 41 51
| | | | | |
1 TGSAGIEAAE ASIDLMKANI ARKEASKESP KKVEEKKMAT WGTDIPEDLE LNEEALANAL 60
61 KKEDLSRREE KDERKRKYNV NYTNDVTSEE MEAYRMKRVH HEDPMRNFPG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
