| Protein: | gi|218201477 |
| Organism: | Oryza sativa Indica Group |
| Length: | 394 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218201477.
| Description | E-value | Query Range |
Subject Range |
|
|
327.0 | [0..2] | [353..1] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MVKETGYYDV LGVSPTATES EIKKAYYMKA RQVHPDKNPN DPKAAENFQA LGEAYQVLSD 60
61 PTQRQAYDAH GKSGISTEGI IDPAAIFAML FGSELFEDYI GQLAMASMA
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| binding | 2.03854863870179 | bayes_pls_golite062009 |
| chaperone binding | 1.61155546076854 | bayes_pls_golite062009 |
| protein binding | 0.912937133925792 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| nucleic acid binding | 0.423488346839872 | bayes_pls_golite062009 |
| transcription regulator activity | 0.146399219759372 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| DNA binding | 0.10307408349439 | bayes_pls_golite062009 |
|
Region A: Residues: [110-394] |
1 11 21 31 41 51
| | | | | |
1 SLDNFGEDEH IDTRRLHERM QAVQKEREEK LAETLKNRLH IYVQGNKEEF VQLAQAEVTR 60
61 LSNAAYGTVM LNTIGYVYSR QAAKELGKKA IFLGVPFVAE WFRDKGHFIK SQVTAAAGAI 120
121 ALMQLQEDLK KYLSAEGHYT EEELEMFMQN HKKVMVDSLW KLNVADIEAT LSRVCQMVLQ 180
181 DGSVRREELR ARAKGLKTLG KIFQRVKLNN DEGEASDMRN IDNMDDNDGS SPDTSPRREP 240
241 PYNPIPNPPH AQSPYVEAPQ FGGTYYPFNF PMPTAPPGAQ RDPIP
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.13705208493215 | bayes_pls_golite062009 |
| unfolded protein binding | 2.04158808514315 | bayes_pls_golite062009 |
| protein binding | 0.882827615657312 | bayes_pls_golite062009 |
| protein disulfide isomerase activity | 0.290861970307477 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 0.290861970307477 | bayes_pls_golite062009 |
| catalytic activity | 0.276917867171685 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 0.0964866497718595 | bayes_pls_golite062009 |
