| Protein: | DPOD1_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1105 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for DPOD1_ORYSJ.
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Region A: Residues: [1-940] |
1 11 21 31 41 51
| | | | | |
1 MSSGGRGGKR RGAPPPGPSG AAAKRAHPGG TPQPPPPAAT AAAPVAEEED MMDEDVFLDE 60
61 TILAEDEEAL LLLDRDEALA SRLSRWRRPA LPADLASGCS RNVAFQQLEI DYVIGESHKV 120
121 LLPNSSGPAA ILRIFGVTRE GHSVCCQVHG FEPYFYISCP MGMGPDDISR FHQTLEGRMK 180
181 DSNRNSNVPR FVKRIELVQK QTIMHYQPQQ SQPFLKIVVA LPTMVASCRG ILERGITIEG 240
241 LGSKSFLTYE SNILFALRFM IDCNIVGGNW IEVPAGKYMK AARIMSYCQL ELDCLYSDLV 300
301 SHAAEGEHSK MAPFRILSFD IECAGRKGHF PEPTHDPVIQ IANLVTLQGE GQPFVRNVMT 360
361 LKSCSPIVGV DVMSFDTERD VLLAWRDFIR EVDPDIIIGY NICKFDLPYL IERAEVLKIV 420
421 EFPILGRIRN SRVRVRDTTF SSRQYGMRES KDVAVEGRVQ FDLLQAMQRD YKLSSYSLNS 480
481 VSAHFLGEQK EDVHHSIISD LQNGNSETRR RLAVYCLKDA YLPQRLLDKL MYIYNYVEMA 540
541 RVTGVPISFL LSRGQSIKVL SQLLRKAKQK NLVIPNIKGQ ASGQDTFEGA TVLEARAGFY 600
601 EKPIATLDFA SLYPSIMMAY NLCYCTLVPP EDARKLNLPP ESVNKTPSGE TFVKPDVQKG 660
661 ILPEILEELL AARKRAKADL KEAKDPFERA VLDGRQLALK ISANSVYGFT GATVGQLPCL 720
721 EISSSVTSYG RQMIEHTKKL VEDKFTTLGG YEHNAEVIYG DTDSVMVQFG VSTVEDAMKL 780
781 GREAADYISG TFIKPIKLEF EKIYFPYLLI SKKRYAGLYW TNPEKFDKMD TKGIETVRRD 840
841 NCLLVKNLVT ECLHKILVDR DVPGAVQYVK NTISDLLMNR VDLSLLVITK GLTKTGEDYA 900
901 VKAAHVELAE RMRKRDAATA PTVGDRVPYV IIKAAKGAKA
|
| Detection Method: |  |
| Confidence: | 165.0 |
| Match: | 2gv9A |
| Description: | No description for 2gv9A was found. |
|
Region A: Residues: [941-990] |
1 11 21 31 41 51
| | | | | |
1 YERSEDPIYV LDNNIPIDPQ YYLENQISKP LLRIFEPILK NASRELLHGS
|
| Detection Method: | |
| Confidence: | 156.0 |
| Match: | 1tgoA |
| Description: | Exonuclease domain of family B (archaeal and phage) DNA polymerases; T4-like DNA polymerase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [991-1105] |
1 11 21 31 41 51
| | | | | |
1 HTRAVSISTP SNSGIMKFAK KQLTCLGCKA VISGSNQTLC FHCKGREAEL YCKTVGNVSE 60
61 LEMLFGRLWT QCQECQGSLH QDVLCTSRDC PIFYRRRKAQ KDMAEARVQL QRWDF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
