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View Structure Prediction Details

Protein: gi|221313806
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221313806.

Description E-value Query
Range
Subject
Range
RNH2_BACCR - Ribonuclease HII OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373...
329.0 [0..1] [252..1]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLTVKDIK DRLQEVKDAQ DPFIAQCEND PRKSVQTLVE QWLKKQAKEK ALKEQWVNMT  60
   61 SYERLARNKG FRLIAGVDEV GRGPLAGPVV ASAVILPEEC EILGLTDSKK LSEKKREEYY 120
  121 ELIMKEALAV GIGIVEATVI DEINIYEASK MAMVKAIQDL SDTPDYLLVD AMTLPLDTAQ 180
  181 ASIIKGDAKS VSIAAGACIA KVTRDRMMSA YAETYPMYGF EKNKGYGTKE HLEALAAYGP 240
  241 TELHRKTFAP VQSFR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 2etjA
Description: Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ribonuclease activity 3.91517707500372 bayes_pls_golite062009
endoribonuclease activity 3.00008907756136 bayes_pls_golite062009
ribonuclease H activity 2.37346218921366 bayes_pls_golite062009
hydrolase activity 2.30893115816458 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.26022264830742 bayes_pls_golite062009
nuclease activity 1.81796593394339 bayes_pls_golite062009
endonuclease activity 1.79009816048707 bayes_pls_golite062009
catalytic activity 1.62277843225829 bayes_pls_golite062009
exoribonuclease activity 1.48827607538468 bayes_pls_golite062009
exoribonuclease activity, producing 5'-phosphomonoesters 1.34153791988846 bayes_pls_golite062009
3'-5'-exoribonuclease activity 0.8085201347205 bayes_pls_golite062009
exonuclease activity 0.39213900591465 bayes_pls_golite062009
endoribonuclease activity, producing 5'-phosphomonoesters 0.13187450705887 bayes_pls_golite062009

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