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View Structure Prediction Details

Protein: gi|221317132
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221317132.

Description E-value Query
Range
Subject
Range
gi|2127047, gi|4... - gi|467456|dbj|BAA05302.1| unknown [Bacillus subtilis], pir||S66097 cell-cycle protein homolog yacA -...
gi|467456|dbj|BA... - unknown [Bacillus subtilis]
389.0 [0..1] [472..15]

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Predicted Domain #1
Region A:
Residues: [1-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVKDFLNK HNLTLKGATI IVGVSGGPDS MALLHALHTL CGRSANVIAA HVDHRFRGAE  60
   61 SEEDMRFVQA YCKAEQLVCE TAQINVTAYA QEKGLNKQAA ARDCRYQFFE EIMSKHQADY 120
  121 LALAHHGDDQ VETMLMKLAK GTLGTGLAGM QPVRRFGTGR IIRPFLTITK EEILHYCHEN 180
  181 GLSYRTDESN AKDDYTRNRF RKTVLPFLKQ ESPDVHKRFQ KVSEALTEDE QFLQSLTKDE 240
  241 MNKVITSQSN TSVEINSSQL LALPMPLQRR GVQLILNYLY ENVPSSFSAH HIQQFLDWAE 300
  301 NGGPSGVLDF PKGLKVVKSY QTCLFTFEQW QCKNVPFEYQ ISGAADETAV LPNGYLIEAR 360
  361 HYADSPEEHG NAVFITSEKK VRFPLTIRTR KAGDRIKLKG MNGSKKVKDI FIDKKLPLQE 420
  421 RDNWPIVTDA SGEIIWIPGL KKSIFEDLVI PNSDRIVLQY RQHEKCRGQA KS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.154902
Match: 1ni5A
Description: Putative cell cycle protein MesJ, N-terminal domain; Putative cell cycle protein MesJ, middle and C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming carbon-oxygen bonds 4.62261539719166 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 4.62261539719166 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 4.6196700624078 bayes_pls_golite062009
phenylalanine-tRNA ligase activity 3.61307332554234 bayes_pls_golite062009
ligase activity 3.26222666347152 bayes_pls_golite062009
catalytic activity 1.19930793139888 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.196167461233561 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 0.137409332385789 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle