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View Structure Prediction Details

Protein: gi|221312585
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221312585.

Description E-value Query
Range
Subject
Range
gi|52785772, gi|... - gi|52785772|ref|YP_091601.1| hypothetical protein BLi02017 [Bacillus licheniformis ATCC 14580], gi|5...
396.0 [0..1] [271..1]

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Predicted Domain #1
Region A:
Residues: [1-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKHTKMLQH PAKPDRPDPL FAKKMQEILG GQFGEISVAM QYLFQGWNTR GNEKYKDLLM  60
   61 DTATEELGHV EMIATMIARL LEDAPLDQQE KAAEDPVIGS ILGGMNPHHA IVSGLGAMPE 120
  121 SSTGVPWSGG YIVASGNLLA DFRANLNAES QGRLQVARLF EMTDDKGVKD MLSFLLARDT 180
  181 MHQNQWLAAI KELEAQEGPV VPGTFPKALE KQEFSHQLIN FSEGEVSAEQ NWLNEKAPDG 240
  241 EAFEYVKEAK TFGEKPELKP APPFVHNTLP GRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.221849
Match: 1jkuA
Description: Manganese catalase (T-catalase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transition metal ion binding 0.79433676142033 bayes_pls_golite062009
iron ion binding 0.63464232051405 bayes_pls_golite062009
binding 0.611079735880102 bayes_pls_golite062009
catalytic activity 0.567768748506245 bayes_pls_golite062009
cation binding 0.43179883940047 bayes_pls_golite062009
metal ion binding 0.43179883940047 bayes_pls_golite062009
ion binding 0.42332144103535 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle