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View Structure Prediction Details

Protein: gi|218200507
Organism: Oryza sativa Indica Group
Length: 1049 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|218200507.

Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSDEAGSS KHHRRDKEKD RERSSSRHHR DRDRERSSSR HHHREDRDDD RDRDRDRERR  60
   61 HREKERDREE RKAREREERE KEKERERARR REERDREERS RRREAAAEEE EEDVDRDRKR 120
  121 RRRSSHHHHH HRDAEPEGPA SGAREEEVVD VEEAERRRQK KKEEEQKQLD EEMETRRRRI 180
  181 KEWQEMKRRE EETKRREQEE AGVGTSAAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAAPAEAEDG GNAGKKWTLD GEESDEEGNQ EDGKKSDDNG GSGAGAMDVD VPNGGDNANG  60
   61 ANAMDEDEID PLDAFMNSMV LPEVAKLESM PAANVDDKND KSAKDAVTNG DKKGPKKVMG 120
  121 RIIQGEDSDS DYADDEDDEG GSEDEDDEEF MKRVKKTKAE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [370-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLAIVDHSKI DYQPFRKNFY IEVKDITKMA AEEVAAYRKQ LELKVHGKDV PKPIKTWVQS  60
   61 GL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2db3A
Description: No description for 2db3A was found.

Predicted Domain #4
Region A:
Residues: [432-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSKLLDTIKK LGFEKPMSIQ AQALPIIMSG RDCIGIAKTG SGKTLAFVLP MLRHVKDQPA  60
   61 VVPGDGPIGL IMAPTRELVV QIHSDIKKFS KALGINCVAI YGGSGVAQQI SELKRGAEIV 120
  121 VCTPGRMIDI LCTSSGKITN LRRVTFLVMD EADRMFDMGF EPQITRIVQN TRPDRQTVLF 180
  181 SATFPRQVEI LARKVLTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 3b6eA
Description: No description for 3b6eA was found.

Predicted Domain #5
Region A:
Residues: [630-850]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVEIQVGGRS VVNKDITQLV EVRPENERFF RLLELLGEWF DKGKILVFVH SQDKCDSLLK  60
   61 DLFQHGYPCL SLHGGKDQTD RESTLADFKS NVCSLLIATS VAARGLDVKE LELVVNYDVP 120
  121 NHYEDYVHRV GRTGRAGRKG FAVTFISEEE ERYAPDLVKA LELSEQAVPE DLKGLADRFM 180
  181 AKVKQGTEQA HGTGYGGSGF KFNEEEDEAR KSAKKAQARE Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.09691
Match: 2jgnA
Description: No description for 2jgnA was found.

Predicted Domain #6
Region A:
Residues: [851-955]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYEEDKSDSD SDEEGGVRKA GGDLAAQAIA AAQAAAAMVA AKAASNANQQ TQGTSVGPLL  60
   61 PLAIASNTQN NEATARALQA AFNIQQNLAR IQAHAVPEHY EAELE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [956-1049]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INDFPQNARW KITHKETLGP IQEWTGAAIT TRGTFFPQGK IVGANERKLY LFIEGPTELS  60
   61 VKKAKAELKR VLEDCANHAL NLPGSAQTGK YSVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle