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View Structure Prediction Details

Protein: gi|218200507
Organism: Oryza sativa Indica Group
Length: 1049 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|218200507.

Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSDEAGSS KHHRRDKEKD RERSSSRHHR DRDRERSSSR HHHREDRDDD RDRDRDRERR  60
   61 HREKERDREE RKAREREERE KEKERERARR REERDREERS RRREAAAEEE EEDVDRDRKR 120
  121 RRRSSHHHHH HRDAEPEGPA SGAREEEVVD VEEAERRRQK KKEEEQKQLD EEMETRRRRI 180
  181 KEWQEMKRRE EETKRREQEE AGVGTSAAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAAPAEAEDG GNAGKKWTLD GEESDEEGNQ EDGKKSDDNG GSGAGAMDVD VPNGGDNANG  60
   61 ANAMDEDEID PLDAFMNSMV LPEVAKLESM PAANVDDKND KSAKDAVTNG DKKGPKKVMG 120
  121 RIIQGEDSDS DYADDEDDEG GSEDEDDEEF MKRVKKTKAE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [370-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLAIVDHSKI DYQPFRKNFY IEVKDITKMA AEEVAAYRKQ LELKVHGKDV PKPIKTWVQS  60
   61 GL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2db3A
Description: No description for 2db3A was found.

Predicted Domain #4
Region A:
Residues: [432-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSKLLDTIKK LGFEKPMSIQ AQALPIIMSG RDCIGIAKTG SGKTLAFVLP MLRHVKDQPA  60
   61 VVPGDGPIGL IMAPTRELVV QIHSDIKKFS KALGINCVAI YGGSGVAQQI SELKRGAEIV 120
  121 VCTPGRMIDI LCTSSGKITN LRRVTFLVMD EADRMFDMGF EPQITRIVQN TRPDRQTVLF 180
  181 SATFPRQVEI LARKVLTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 3b6eA
Description: No description for 3b6eA was found.

Predicted Domain #5
Region A:
Residues: [630-850]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVEIQVGGRS VVNKDITQLV EVRPENERFF RLLELLGEWF DKGKILVFVH SQDKCDSLLK  60
   61 DLFQHGYPCL SLHGGKDQTD RESTLADFKS NVCSLLIATS VAARGLDVKE LELVVNYDVP 120
  121 NHYEDYVHRV GRTGRAGRKG FAVTFISEEE ERYAPDLVKA LELSEQAVPE DLKGLADRFM 180
  181 AKVKQGTEQA HGTGYGGSGF KFNEEEDEAR KSAKKAQARE Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.09691
Match: 2jgnA
Description: No description for 2jgnA was found.

Predicted Domain #6
Region A:
Residues: [851-955]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYEEDKSDSD SDEEGGVRKA GGDLAAQAIA AAQAAAAMVA AKAASNANQQ TQGTSVGPLL  60
   61 PLAIASNTQN NEATARALQA AFNIQQNLAR IQAHAVPEHY EAELE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [956-1049]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INDFPQNARW KITHKETLGP IQEWTGAAIT TRGTFFPQGK IVGANERKLY LFIEGPTELS  60
   61 VKKAKAELKR VLEDCANHAL NLPGSAQTGK YSVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle