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View Structure Prediction Details

Protein: gi|221312800
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 162 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221312800.

Description E-value Query
Range
Subject
Range
gi|17933427 - gi|17933427|gb|AAL48287.1|AF452495_1 aminoimidazole ribonucleotide carboxylase [Vigna unguiculata]
241.0 [0..3] [161..466]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPLVGIIMG STSDWETMKH ACDILDELNV PYEKKVVSAH RTPDFMFEYA ETARERGIKV  60
   61 IIAGAGGAAH LPGMTAAKTT LPVIGVPVQS KALNGMDSLL SIVQMPGGVP VATTSIGKAG 120
  121 AVNAGLLAAQ ILSAFDEDLA RKLDERRENT KQTVLESSDQ LV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.39794
Match: 1xmpA
Description: Crystal Structure of PurE (BA0288) from Bacillus anthracis at 1.8 Resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoribosylaminoimidazole carboxylase activity 12.126616405613 bayes_pls_golite062009
carboxy-lyase activity 8.23768576957333 bayes_pls_golite062009
catalytic activity 1.94758748334979 bayes_pls_golite062009
carbon-carbon lyase activity 0.735133792277863 bayes_pls_golite062009
lyase activity 0.685887227538264 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle