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View Structure Prediction Details

Protein: gi|218189011
Organism: Oryza sativa Indica Group
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218189011.

Description E-value Query
Range
Subject
Range
gi|92873186 - gi|92873186|gb|ABE81683.1| DNA-binding WRKY [Medicago truncatula]
171.0 [0..9] [236..14]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLQLQGDD HDDEALPHFP YFAVPSPPPL AVAPAASATT SDGHQHGPLE VLEQPPCSNN  60
   61 LHPDGLVDGP QLAATTAVPM MLPAMTSLDW QSLLQTCLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPPPVLEQQQ PAAAAQADQY SGENDHGDLQ AAESSGAGNK EKQVMAKGGA GRPSGTKKKA  60
   61 SRPRFAFQTR SDNDILDDGY RWRKYGQKAV KNSKHPRSYY RCTHHTCNVK KQVQRLAKDT 120
  121 SIVVTTYEGV HNHPCEKLME ALTPILKQLQ FLSQF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.39794
Match: 1wj2A
Description: Solution Structure of the C-terminal WRKY Domain of AtWRKY4
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle