| Protein: | gi|168277868 |
| Organism: | synthetic construct |
| Length: | 628 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|168277868.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..628] | [1..628] |
|
|
0.0 | [1..628] | [1..628] |
|
|
0.0 | [1..628] | [1..628] |
|
|
0.0 | [13..628] | [13..623] |
|
|
0.0 | [1..628] | [1..629] |
|
|
0.0 | [25..628] | [25..629] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MAAAGAGPGQ EAGAGPGPGA VANATGAEEG EMKPVAAGAA APPGEGISAA PTVEPSSGEA 60
61 EGGEANLVDV SGGLETESSN GKDTLEGAGD TSEVMDT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [98-269] |
1 11 21 31 41 51
| | | | | |
1 QAGSVDEENG RQLGEVELQC GICTKWFTAD TFGIDTSSCL PFMTNYSFHC NVCHHSGNTY 60
61 FLRKQANLKE MCLSALANLT WQSRTQDEHP KTMFSKDKDI IPFIDKYWEC MTTRQRPGKM 120
121 TWPNNIVKTM SKERDVFLVK EHPDPGSKDP EEDYPKFGLL DQDLSNIGPA YD
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 2f6jA |
| Description: | No description for 2f6jA was found. |
|
Region A: Residues: [270-351] |
1 11 21 31 41 51
| | | | | |
1 NQKQSSAVST SGNLNGGIAA GSSGKGRGAK RKQQDGGTTG TTKKARSDPL FSAQRLPPHG 60
61 YPLEHPFNKD GYRYILAEPD PH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [352-628] |
1 11 21 31 41 51
| | | | | |
1 APDPEKLELD CWAGKPIPGD LYRACLYERV LLALHDRAPQ LKISDDRLTV VGEKGYSMVR 60
61 ASHGVRKGAW YFEITVDEMP PDTAARLGWS QPLGNLQAPL GYDKFSYSWR SKKGTKFHQS 120
121 IGKHYSSGYG QGDVLGFYIN LPEDTETAKS LPDTYKDKAL IKFKSYLYFE EKDFVDKAEK 180
181 SLKQTPHSEI IFYKNGVNQG VAYKDIFEGV YFPAISLYKS CTVSINFGPC FKYPPKDLTY 240
241 RPMSDMGWGA VVEHTLADVL YHVETEVDGR RSPPWEP
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 2fnjA |
| Description: | No description for 2fnjA was found. |
| Term | Confidence | Notes |
| binding | 2.40096962515027 | bayes_pls_golite062009 |
| transcription regulator activity | 2.15398264148864 | bayes_pls_golite062009 |
| nucleic acid binding | 1.95513305822187 | bayes_pls_golite062009 |
| protein binding | 1.80794638640093 | bayes_pls_golite062009 |
| DNA binding | 1.80079581406991 | bayes_pls_golite062009 |
| transcription activator activity | 1.26528137349343 | bayes_pls_golite062009 |
| transcription factor activity | 1.15427978494805 | bayes_pls_golite062009 |
