| Protein: | gi|190408196 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 1361 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190408196.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [58..1360] | [1..1215] |
|
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0.0 | [58..1357] | [1..1210] |
|
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0.0 | [1..1361] | [1..1361] |
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0.0 | [58..1360] | [1..1215] |
|
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0.0 | [58..1360] | [1..1218] |
|
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0.0 | [57..1359] | [6..1204] |
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0.0 | [59..1356] | [3..1136] |
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Region A: Residues: [1-858] |
1 11 21 31 41 51
| | | | | |
1 MWGGGKMAVV SLSPHTAKMR KLFGQASTTM AYDGLKREAE RRTRSDHNIT MVAKDDELYL 60
61 YHLTLKKQTN FVHSCIGHFV DLEAGSKREQ SQLCVATETH LELYDTADGE LKLIAKFQNL 120
121 FATITSMKSL DLPHSGSRAK ASNWPTFLAL TSDSGNLSIV QIIMHAGALR LKTLVNQPLT 180
181 RTTLRRVSPI SYMEIDPNGR CIILSSVEQN KLCFLVDYAQ KLRISSPLEI IRPHMVTLDM 240
241 AVVDVNFNNP CFVTLEIDNA ATQLSVHLIF YVLELGLNHI VKKADYLVNP SANFVLSLPD 300
301 LSRYNITTSL SDNNYDADYD TLFNPFVVIG FENHILVKDM NGFFSLKVEI PKRSITNSRH 360
361 KNVTIISGIV QKLKNDFFVL LQSNHGDLFK LTVSPDTNDR NRPLVQLSYF DTIQNSHQLH 420
421 IFKNGYLFAL SEMNNNFLFQ FEKLGVEKND FSNVLTSKDP NKSLVFEPSI KLQNLSILSQ 480
481 QLNLNPSIKS QIVSDSPLSI ATKHFTNNKI ITLTNAVNYS NLISTSLPPN ATKLWLIPDP 540
541 ATTGDNNTLL FITFPKKTMI LQIDNESMEE LTPDEATRSA FKLSQDTTIH TCLMGSHSII 600
601 QVCTAELRHI VPTGKSRYSN KLTWVPPAGI RIVCATSSKT QLIISLSNYE LVYFKIDVSS 660
661 DSLIELTTHP ELDTMPSKVA IVQDTQHADL LAIADNEGMI KIMSLKDQKE DFLTVISLQL 720
721 VSEKISDMIM VRDSSIGQLN LHVGLENGVY MKFHIGDVDG SFTDIKRRFL GLKPVSLSYL 780
781 REISVSLNNE EEEEEEEDDD DEKEEEEINS SGAKWMSCVV CHSSSTWVSY TWKNVWTIRQ 840
841 LKDQNMLSCS KFVNADVA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [859-932] |
1 11 21 31 41 51
| | | | | |
1 INGVCSISSS GRLNIGRVSN FPTLDNWFHV HESSVNKQEN GGGDESNEEE EDEMEEEMEM 60
61 LQISTFRPRT ILSF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.447 | b.36.1 | PDZ domain-like |
| View | Download | 0.387 | d.15.1 | Ubiquitin-like |
| View | Download | 0.563 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.396 | d.15.3 | MoaD/ThiS |
| View | Download | 0.409 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.334 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.328 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.325 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.323 | d.45.1 | ClpS-like |
| View | Download | 0.322 | d.15.5 | Staphylokinase/streptokinase |
| View | Download | 0.314 | d.34.1 | DNA-binding domain of Mlu1-box binding protein MBP1 |
| View | Download | 0.298 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.296 | a.2.7 | tRNA-binding arm |
| View | Download | 0.282 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.276 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.265 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.261 | d.15.1 | Ubiquitin-like |
| View | Download | 0.247 | d.42.1 | POZ domain |
| View | Download | 0.246 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.235 | d.217.1 | SAND domain-like |
| View | Download | 0.229 | d.58.12 | eEF-1beta-like |
| View | Download | 0.229 | d.42.1 | POZ domain |
| View | Download | 0.224 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.219 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.217 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.214 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.214 | d.15.11 | Doublecortin (DC) |
| View | Download | 0.203 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.200 | b.71.1 | Glycosyl hydrolase domain |
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Region A: Residues: [933-1361] |
1 11 21 31 41 51
| | | | | |
1 PNNPKSILFI DNHSGKKQCR ISLQIDGECL KFGSSDHLYK ILDDIDCVSA AIIDFTRQAD 60
61 HLIICAGDKR LLTYKILVNK DKLSFDIELL HQTEIISPIH AMLKFKNFLL TAMGSTIVLY 120
121 GLGKKQLLRR SVTQTPVSIT KIVSMHQWNY ERLAVGDIHE SVTLFIWDPA GNVFIPYVDD 180
181 SVKRHVTVLK FLDEATVIGA DRYGNAWTLR SPPECEKIMS NHDPSELSNG AIKYPLDVIT 240
241 LQQKLPNTYD CKFKFQLLNH FFVNDIITDF HILDSLSNSD RPGCIYMGLQ GTVGCFIPLL 300
301 SKGNVFMMGN IENIMAEADD TFYLDYESRK KNNNMRKEDD EEESGSVVLQ GRHGIEDEII 360
361 CEGSCSILGR DHQEYRSYYA PVRKVIDGDL CENFLRLSLN EQEFLAKNLK SVQVEDIIQT 420
421 INEVRTNYM
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| Detection Method: | |
| Confidence: | 119.113509 |
| Match: | PF03178 |
| Description: | CPSF A subunit region |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
