YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|221312499
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221312499.

Description E-value Query
Range
Subject
Range
gi|149952125, gi... - gi|77685710|ref|ZP_00801098.1| Phenylacrylic acid decarboxylase [Alkaliphilus metalliredigenes QYMF]...
228.0 [0..13] [197..1]

Back

Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAEFKRKGG GKVKLVVGMT GATGAIFGVR LLQWLKAAGV ETHLVVSPWA NVTIKHETGY  60
   61 TLQEVEQLAT YTYSHKDQAA AISSGSFDTD GMIVAPCSMK SLASIRTGMA DNLLTRAADV 120
  121 MLKERKKLVL LTRETPLNQI HLENMLALTK MGTIILPPMP AFYNRPRSLE EMVDHIVFRT 180
  181 LDQFGIRLPE AKRWNGIEKQ KGGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 1sbzA
Description: Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity 5.88631349530005 bayes_pls_golite062009
carboxy-lyase activity 2.27469953971238 bayes_pls_golite062009
catalytic activity 1.88716391063227 bayes_pls_golite062009
carbon-carbon lyase activity 1.67751595868044 bayes_pls_golite062009
phosphopantothenoylcysteine decarboxylase activity 1.6488492075417 bayes_pls_golite062009
lyase activity 0.646446561158526 bayes_pls_golite062009
phosphopantothenate--cysteine ligase activity 0.35505046579356 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle