YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|190404892
Organism: Saccharomyces cerevisiae RM11-1a
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190404892.

Description E-value Query
Range
Subject
Range
gi|190404892 - gi|190404892|gb|EDV08159.1| protein GIR2 [Saccharomyces cerevisiae RM11-1a]
GIR2 - Highly-acidic cytoplasmic RWD domain-containing protein of unknown function; interacts with Rbg1p an...
gi|151942136 - gi|151942136|gb|EDN60492.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|207346662 - gi|207346662|gb|EDZ73095.1| YDR152Wp-like protein [Saccharomyces cerevisiae AWRI1631]
GIR2_YEAST - Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1
1.0E-65 [1..265] [1..265]
gi|5138918 - gi|5138918|gb|AAD40376.1| PTD013 [Homo sapiens]
3.0E-41 [2..251] [3..209]
RWDD1_RAT - RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1
4.0E-41 [2..251] [3..209]
gi|16768964 - gi|16768964|gb|AAL28701.1| LD12396p [Drosophila melanogaster]
2.0E-39 [2..253] [4..212]
gi|7305017, gi|6... - gi|7305017|ref|NP_038747.1| eukaryotic translation initiation factor 2 alpha kinase 4 [Mus musculus]...
7.0E-38 [2..178] [18..180]
gi|23198350, gi|... - pir||C96556 unknown protein [imported] - Arabidopsis thaliana, gi|23198350|gb|AAN15702.1| unknown p...
1.0E-37 [2..234] [3..199]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-36 [2..190] [9..189]

Back

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYKEEQKQE LEVLESIYPD ELRIINDEYP KIKFEVAIKL ELDTGDSTSV LTKEHTIIAE  60
   61 FKLPENYPDE PCLISLEAQE VALNDNEEDN EEDEDEVEYD DHGNKVLKKF EN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPDLISFKGY LPELTVQLES QIETDMLLGM QMCFALISSI KERCEQWYSE QLNKLEKQYE  60
   61 LEAQEREKKE QAKFHGTKVT RESYLEWRSK FRQELKLDER DQVRRMKAHH GKLTGKQMFE 120
  121 QGVVGTGDEY MEEDDASVDD VAKGLAKTEI ANQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.901 0.281 cytoplasm a.25.1 Ferritin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle