| Protein: | gi|168277428 |
| Organism: | synthetic construct |
| Length: | 1174 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|168277428.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1174] | [62..1235] |
|
|
0.0 | [1..1174] | [1..1174] |
|
|
0.0 | [1..1174] | [1..1174] |
|
|
0.0 | [1..1174] | [1..1174] |
|
Region A: Residues: [1-1174] |
1 11 21 31 41 51
| | | | | |
1 MYDADEDMQY DEDDDEITPD LWQEACWIVI SSYFDEKGLV RQQLDSFDEF IQMSVQRIVE 60
61 DAPPIDLQAE AQHASGEVEE PPRYLLKFEQ IYLSKPTHWE RDGAPSPMMP NEARLRNLTY 120
121 SAPLYVDITK TVIKEGEEQL QTQHQKTFIG KIPIMLRSTY CLLNGLTDRD LCELNECPLD 180
181 PGGYFIINGS EKVLIAQEKM ATNTVYVFAK KDSKYAYTGE CRSCLENSSR PTSTIWVSML 240
241 ARGGQGAKKS AIGQRIVATL PYIKQEVPII IVFRALGFVS DRDILEHIIY DFEDPEMMEM 300
301 VKPSLDEAFV IQEQNVALNF IGSRGAKPGV TKEKRIKYAK EVLQKEMLPH VGVSDFCETK 360
361 KAYFLGYMVH RLLLAALGRR ELDDRDHYGN KRLDLAGPLL AFLFRGMFKN LLKEVRIYAQ 420
421 KFIDRGKDFN LELAIKTRII SDGLKYSLAT GNWGDQKKAH QARAGVSQVL NRLTFASTLS 480
481 HLRRLNSPIG RDGKLAKPRQ LHNTLWGMVC PAETPEGHAV GLVKNLALMA YISVGSQPSP 540
541 ILEFLEEWSM ENLEEISPAA IADATKIFVN GCWVGIHKDP EQLMNTLRKL RRQMDIIVSE 600
601 VSMIRDIRER EIRIYTDAGR ICRPLLIVEK QKLLLKKRHI DQLKEREYNN YSWQDLVASG 660
661 VVEYIDTLEE ETVMLAMTPD DLQEKEVAYC STYTHCEIHP SMILGVCASI IPFPDHNQSP 720
721 RNTYQSAMGK QAMGVYITNF HVRMDTLAHV LYYPQKPLVT TRSMEYLRFR ELPAGINSIV 780
781 AIASYTGYNQ EDSVIMNRSA VDRGFFRSVF YRSYKEQESK KGFDQEEVFE KPTRETCQGM 840
841 RHAIYDKLDD DGLIAPGVRV SGDDVIIGKT VTLPENEDEL ESTNRRYTKR DCSTFLRTSE 900
901 TGIVDQVMVT LNQEGYKFCK IRVRSVRIPQ IGDKFASRHG QKGTCGIQYR QEDMPFTCEG 960
961 ITPDIIINPH AIPSRMTIGH LIECLQGKVS ANKGEIGDAT PFNDAVNVQK ISNLLSDYGY1020
1021 HLRGNEVLYN GFTGRKITSQ IFIGPTYYQR LKHMVDDKIH SRARGPIQIL NRQPMEGRSR1080
1081 DGGLRFGEME RDCQIAHGAA QFLRERLFEA SDPYQVHVCN LCGIMAIANT RTHTYECRGC1140
1141 RNKTQISLVR MPYACKLLFQ ELMSMSIAPR MMSV
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1i3qB |
| Description: | RBP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-directed RNA polymerase activity | 10.2021663255698 | bayes_pls_golite062009 |
| RNA polymerase activity | 10.2021663255698 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 7.6240729546188 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 6.31198922553685 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 5.44374972993429 | bayes_pls_golite062009 |
| transferase activity | 4.83218811360621 | bayes_pls_golite062009 |
| transcription regulator activity | 2.34884279395902 | bayes_pls_golite062009 |
| nucleic acid binding | 2.33174616086951 | bayes_pls_golite062009 |
| DNA binding | 2.27079409864244 | bayes_pls_golite062009 |
| binding | 1.73416306650822 | bayes_pls_golite062009 |
| RNA polymerase II transcription mediator activity | 1.53259746846673 | bayes_pls_golite062009 |
| catalytic activity | 1.36406839864424 | bayes_pls_golite062009 |
| RNA binding | 1.12618950637766 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.847783043631028 | bayes_pls_golite062009 |
| protein binding | 0.45174975126993 | bayes_pls_golite062009 |
