| Protein: | gi|221324226 |
| Organism: | Bacillus subtilis subsp. subtilis str. SMY |
| Length: | 786 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221324226.
| Description | E-value | Query Range |
Subject Range |
|
|
811.0 | [0..1] | [781..1] |
|
Region A: Residues: [1-563] |
1 11 21 31 41 51
| | | | | |
1 MLASKMRWEI QRPDQDKVKS LTEQLHITPL VASLLVKRGF DTAESARLFL HTKDADFYDP 60
61 FEMKGMKEAA DRIKQAISQQ EKIMIYGDYD ADGVTSTSVM LHTLQKLSAQ VDFYIPDRFK 120
121 EGYGPNEQAF RSIKERGFSL IITVDTGIAA VHEAKVAKEL GLDVIITDHH EPGPELPDVR 180
181 AIVHPKQPGC TYPFKELAGV GVAFKLAHAL LGELPDELLD LAAIGTIADL VPLHDENRLI 240
241 ATLGLERLRR TNRLGLKELI KLSGGDIGEA NEETVGFQLA PRLNAVGRIE QADPAVHLLM 300
301 SEDSFEAEEL AAEIDQLNKE RQKMVSKMTD EAIEMVEQQG LDQTAIVVAK AGWNPGVVGI 360
361 VASKLVDRFY RPAIVLGIDE EKGIAKGSAR SIRGFNLFES LSECRDILPH FGGHPMAAGM 420
421 TLKAEDVPDL RSRLNEIADN TLTEEDFIPV QEVDLVCGVE DITVESIAEM NMLSPFGMLN 480
481 PKPHVLVENA VLEDVRKIGA NKTHVKMTIR NESSQLDCVG FNKGELQEGI VPGSRISIVG 540
541 EMSINEWNNR KKPQLMIKDA AVS
|
| Detection Method: |  |
| Confidence: | 83.0 |
| Match: | 1ir6A |
| Description: | Exonuclease RecJ |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| deoxyribonuclease activity | 3.0051764426766 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 2.95229098929295 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 2.9500987818733 | bayes_pls_golite062009 |
| single-stranded DNA specific exodeoxyribonuclease activity | 2.72110588435439 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 2.59454342567539 | bayes_pls_golite062009 |
| exonuclease activity | 2.57506733103287 | bayes_pls_golite062009 |
| catalytic activity | 2.15198373249096 | bayes_pls_golite062009 |
| hydrolase activity | 1.87485052902921 | bayes_pls_golite062009 |
| nuclease activity | 1.375718110904 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.17433205668743 | bayes_pls_golite062009 |
|
Region A: Residues: [564-786] |
1 11 21 31 41 51
| | | | | |
1 EWQLFDLRGK RTWEDTVSAL PSAKRAIVSF KEDSTTLLQT EDLRREVHVI SSKDQAKAFD 60
61 LDGAYIVLLD PPPSLDMLAR LLEGKAPERI YFIFLNHEDH FLSTFPARDH FKWYYAFLLK 120
121 RGAFDVKKHG SELAKHKGWS VETINFMTKV FFDLGFVKIE NGVLSVVSGA KKRDLTDSQT 180
181 YQAKQQLMEL DQKLNYSSAE ELKEWLNKLM KQDSEAYEST RRT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
