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Protein Overview: gi|221324226

General Information:
Name(s) found: gi|221324226 [NCBI NR]
Description(s) found:
  • gi|221324226|ref|ZP_03605520.1| hypothetical protein BsubsS_15062 [Bacillus subtilis subsp. subtilis str. SMY] [NCBI NR]
    • Organism: Bacillus subtilis subsp. subtilis str. SMY
    Length: 786 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASKMRWEI QRPDQDKVKS LTEQLHITPL VASLLVKRGF DTAESARLFL HTKDADFYDP  60
   61 FEMKGMKEAA DRIKQAISQQ EKIMIYGDYD ADGVTSTSVM LHTLQKLSAQ VDFYIPDRFK 120
  121 EGYGPNEQAF RSIKERGFSL IITVDTGIAA VHEAKVAKEL GLDVIITDHH EPGPELPDVR 180
  181 AIVHPKQPGC TYPFKELAGV GVAFKLAHAL LGELPDELLD LAAIGTIADL VPLHDENRLI 240
  241 ATLGLERLRR TNRLGLKELI KLSGGDIGEA NEETVGFQLA PRLNAVGRIE QADPAVHLLM 300
  301 SEDSFEAEEL AAEIDQLNKE RQKMVSKMTD EAIEMVEQQG LDQTAIVVAK AGWNPGVVGI 360
  361 VASKLVDRFY RPAIVLGIDE EKGIAKGSAR SIRGFNLFES LSECRDILPH FGGHPMAAGM 420
  421 TLKAEDVPDL RSRLNEIADN TLTEEDFIPV QEVDLVCGVE DITVESIAEM NMLSPFGMLN 480
  481 PKPHVLVENA VLEDVRKIGA NKTHVKMTIR NESSQLDCVG FNKGELQEGI VPGSRISIVG 540
  541 EMSINEWNNR KKPQLMIKDA AVSEWQLFDL RGKRTWEDTV SALPSAKRAI VSFKEDSTTL 600
  601 LQTEDLRREV HVISSKDQAK AFDLDGAYIV LLDPPPSLDM LARLLEGKAP ERIYFIFLNH 660
  661 EDHFLSTFPA RDHFKWYYAF LLKRGAFDVK KHGSELAKHK GWSVETINFM TKVFFDLGFV 720
  721 KIENGVLSVV SGAKKRDLTD SQTYQAKQQL MELDQKLNYS SAEELKEWLN KLMKQDSEAY 780
  781 ESTRRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..563] PSI-BLAST 83.0 Exonuclease RecJ
    2 View Details [564..786] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • deoxyribonuclease activity
    		•  3.0051764426766 bayes_pls_golite062009
  • exodeoxyribonuclease activity
    		•  2.95229098929295 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  2.9500987818733 bayes_pls_golite062009
  • single-stranded DNA specific exodeoxyribonuclease activity
    		•  2.72110588435439 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  2.59454342567539 bayes_pls_golite062009
  • exonuclease activity
    		•  2.57506733103287 bayes_pls_golite062009
  • catalytic activity
    		•  2.15198373249096 bayes_pls_golite062009
  • hydrolase activity
    		•  1.87485052902921 bayes_pls_golite062009
  • nuclease activity
    		•  1.375718110904 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.17433205668743 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle