| Protein: | gi|190406223 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 513 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406223.
| Description | E-value | Query Range |
Subject Range |
|
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5.0E-89 | [1..513] | [1..513] |
|
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2.0E-73 | [13..512] | [6..477] |
|
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6.0E-72 | [13..512] | [6..477] |
|
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5.0E-71 | [13..511] | [56..521] |
|
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8.0E-64 | [47..512] | [16..452] |
|
|
8.0E-57 | [252..494] | [50..272] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MADKLMDKNF EELCYSCRTG DMDNVDRLIS TGVNVNSVDK FDNSPLFLAS LCGHEAVVKL 60
61 LLQRGAVCDR DRYEGARCIY GALTDTIRDT LLSY
|
| Detection Method: |  |
| Confidence: | 39.519517 |
| Match: | 1myo__ |
| Description: | Myotrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [95-217] |
1 11 21 31 41 51
| | | | | |
1 DISKAVDVKQ PFATHISSMY NDEGFLKRDI TFRVSNGKLF TAHKFLLCAR SEILAEKMVN 60
61 EWAKHEIVSL EVRPDIFDIF LKFLYLIPIL HQIEPGQYEE LIELSSKFDI ELLPEFLDKA 120
121 RHT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.506 | 0.601 | cytoplasm | a.118.8 | TPR-like |
| View | Download | 0.390 | 0.000 | cytoplasm | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.443 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.324 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.319 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.300 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.298 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.284 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.281 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.269 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.268 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.254 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.246 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.239 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.233 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.233 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.225 | N/A | N/A | d.189.1 | PX domain |
| View | Download | 0.220 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.203 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
|
Region A: Residues: [218-391] |
1 11 21 31 41 51
| | | | | |
1 ADPTEKSRLM SDYQYKFTEV ARSQLLIFVN NCIFRSTVDL ANSERRVFSL MNCPAYPDVQ 60
61 LMVKNRNGAI RIYPCHLAVL SRAEYFKVMF TNNFKEKVTY IKAKHVTGKY NSIIPQLTLP 120
121 NCEFEVAEII LRYLYADNTD IPWMYAVDVL LLADILLEDR LKTIASTIIT QSKE
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1buoA_ |
| Description: | Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [392-513] |
1 11 21 31 41 51
| | | | | |
1 FIQQYNVFDV LYLSWEIGVE RLEQFAAKFI AIHLQELYKD PEIKRAIMLS SQRISLRQET 60
61 DTIELVDDIR YYLLRKYSFE PDDVELFENQ DDLEYLKQVG YLEYRKDMGM LDNILADLEL 120
121 DV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.476 | 0.321 | cytoplasm | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.489 | 0.276 | cytoplasm | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.589 | 0.066 | cytoplasm | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.486 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.442 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.440 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.439 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.433 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.430 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.411 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.391 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.375 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.365 | N/A | N/A | a.135.1 | Tetraspanin |
| View | Download | 0.361 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.350 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.337 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.333 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.332 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.325 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.318 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.315 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.314 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.301 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.298 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.289 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.278 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.276 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.272 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.267 | N/A | N/A | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.265 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.260 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.258 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.255 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.246 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.239 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.239 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.239 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.235 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.235 | N/A | N/A | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.235 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.233 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.232 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.231 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.220 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.220 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.213 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.207 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.206 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.206 | N/A | N/A | a.101.1 | Uteroglobin-like |
| View | Download | 0.205 | N/A | N/A | d.189.1 | PX domain |
| View | Download | 0.205 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.202 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
