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View Structure Prediction Details

Protein: gi|221313948
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221313948.

Description E-value Query
Range
Subject
Range
gi|216396, gi|226395 - gi|226395|prf||1510222A Gln synthetase, gi|216396|dbj|BAA00730.1| glutamine synthetase [Bacillus sub...
552.0 [0..1] [444..1]

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Predicted Domain #1
Region A:
Residues: [1-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKYTREDIE KLVKEENVKY IRLQFTDILG TIKNVEIPVS QLGKALDNKV MFDGSSIEGF  60
   61 VRIEESDMYL YPDLNTFVIF PWTAEKGKVA RFICDIYNPD GTPFEGDPRN NLKRILKEME 120
  121 DLGFSDFNLG PEPEFFLFKL DEKGEPTLEL NDKGGYFDLA PTDLGENCRR DIVLELEEMG 180
  181 FEIEASHHEV APGQHEIDFK YAGAVRSCDD IQTFKLVVKT IARKHGLHAT FMPKPLFGVN 240
  241 GSGMHCNLSL FKNGVNAFFD ENADLQLSET AKHFIAGIVK HATSFTAVTN PTVNSYKRLV 300
  301 PGYEAPCYVA WSAQNRSPLI RIPASRGIST RVEVRSVDPA ANPYLALSVL LAAGLDGIKN 360
  361 KLEAPAPIDR NIYVMSKEER MENGIVDLPA TLAEALEEFK SNEVMVKALG EHLFEHFIEA 420
  421 KEIEWDMFRT QVHPWEREQY MSQY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 138.0
Match: 1f1hA
Description: Glutamine synthetase, N-terminal domain; Glutamine synthetase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ammonia ligase activity 6.27241182807427 bayes_pls_golite062009
acid-ammonia (or amide) ligase activity 5.91942691148686 bayes_pls_golite062009
ligase activity 1.27889290664771 bayes_pls_golite062009
catalytic activity 1.08973967683802 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.0373860162850559 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle