| Protein: | gi|190406394 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406394.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..335] | [1..335] |
|
|
0.0 | [33..333] | [18..318] |
|
|
2.0E-99 | [40..333] | [444..753] |
|
|
9.0E-99 | [40..335] | [562..874] |
|
|
3.0E-98 | [26..326] | [109..408] |
|
|
4.0E-71 | [40..245] | [562..772] |
|
|
1.0E-56 | [99..316] | [406..588] |
|
|
2.0E-56 | [99..316] | [388..570] |
|
Region A: Residues: [1-58] |
1 11 21 31 41 51
| | | | | |
1 MAFQDPTYDQ NKSRHINNSH LQGPNQETIE MKSKHVSFKP SRDFHTNDYS NNYIHGKS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.354 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.354 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.343 | d.42.1 | POZ domain |
| View | Download | 0.343 | d.42.1 | POZ domain |
| View | Download | 0.436 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.436 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.459 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.459 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.327 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.327 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.325 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.304 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.268 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.237 | a.4.1 | Homeodomain-like |
| View | Download | 0.236 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.218 | d.58.17 | Metal-binding domain |
| View | Download | 0.217 | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
|
Region A: Residues: [59-335] |
1 11 21 31 41 51
| | | | | |
1 LPQQHVTNIE NRVDGYPKLQ KLFQAKAKQI NQFATTPFGC KIGIDSIVPT LNHWIQNENL 60
61 TFDVVMIGCL TENQFIYPIL TQLPLDRLIS KPGFLFIWAN SQKINELTKL LNNEIWAKKF 120
121 RRSEELVFVP IDKKSPFYPG LDQDDETLME KMQWHCWMCI TGTVRRSTDG HLIHCNVDTD 180
181 LSIETKDTTN GAVPSHLYRI AENFSTATRR LHIIPARTGY ETPVKVRPGW VIVSPDVMLD 240
241 NFSPKRYKEE IANLGSNIPL KNEIELLRPR SPVQKAQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
