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View Structure Prediction Details

Protein: gi|197216085, gi...
Organism: Bos indicus
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|197216085, gi....

Description E-value Query
Range		 Subject
Range
IL5_HORSE - Interleukin-5 OS=Equus caballus GN=IL5 PE=2 SV=1
 252.0 [0..1] [133..1]
IL5_SHEEP - Interleukin-5 OS=Ovis aries GN=IL5 PE=2 SV=1
 237.0 [0..3] [134..1]
IL5_FELCA - Interleukin-5 OS=Felis catus GN=IL5 PE=2 SV=1
 230.0 [0..1] [134..1]
IL5_PIG - Interleukin-5 OS=Sus scrofa GN=IL5 PE=2 SV=1
 227.0 [0..1] [134..1]
IL5_MERUN - Interleukin-5 OS=Meriones unguiculatus GN=IL5 PE=2 SV=1
 223.0 [0..1] [133..1]
gi|55741698 - ref|NP_001006951.1| interleukin 5 [Canis familiaris]
IL5_CANLF - Interleukin-5 OS=Canis lupus familiaris GN=IL5 PE=2 SV=1
 221.0 [0..1] [134..1]
IL5_MOUSE - Interleukin-5 OS=Mus musculus GN=Il5 PE=1 SV=1
 221.0 [0..2] [133..3]
IL5_SIGHI - Interleukin-5 OS=Sigmodon hispidus GN=IL5 PE=2 SV=1
 221.0 [0..1] [133..1]
IL5_RAT - Interleukin-5 OS=Rattus norvegicus GN=Il5 PE=3 SV=1
gi|313255 - gi|313255|emb|CAA38283.1| interleukin 5 [Rattus rattus]
 220.0 [0..1] [133..1]

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Predicted Domain #1
Region A:
Residues: [1-134] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMHLHLTLV ALGAAYVCAN AVESTMNRLV AETLTLLSSH RTLLIGDGNL MIPTPQHTNH  60
   61 QLCIEEVFQG IDTLKNQTAQ GDAVKKIFQN LSLIKEYIDL QKRKCGGERW RVKQFLDYLQ 120
  121 VFLGVINTEW TMES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1hulA
Description: Interleukin-5
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle