YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|221319992
Organism: Bacillus subtilis subsp. subtilis str. JH642
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221319992.

Description E-value Query
Range
Subject
Range
gi|51974518, gi|... - gi|52141049|ref|YP_085780.1| folylpolyglutamate synthase [Bacillus cereus E33L], gi|51974518|gb|AAU1...
403.0 [0..1] [430..1]

Back

Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTAYQDARS WIHGRLKFGV KPGLGRMKQL MARLGHPEKK IRAFHVAGTN GKGSTVAFIR  60
   61 SMLQEAGYTV GTFTSPYIIT FNERISVNGI PISDEEWTAL VNQMKPHVEA LDQTEYGQPT 120
  121 EFEIMTACAF LYFAEFHKVD FVIFETGLGG RFDSTNVVEP LLTVITSIGH DHMNILGNTI 180
  181 EEIAGEKAGI IKEGIPIVTA VTQPEALQVI RHEAERHAAP FQSLHDACVI FNEEALPAGE 240
  241 QFSFKTEEKC YEDIRTSLIG THQRQNAALS ILAAEWLNKE NIAHISDEAL RSGLVKAAWP 300
  301 GRLELVQEHP PVYLDGAHNE EGVEKLAETM KQRFANSRIS VVFSALKDKP YQNMIKRLET 360
  361 IAHAIHFASF DFPRASLAKD LYDASEISNK SWSEDPDDVI KFIESKKGSN EIVLITGSLY 420
  421 FISDIRKRLK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.0
Match: 1o5zA
Description: Crystal structure of Folylpolyglutamate synthase (TM0166) from Thermotoga maritima at 2.10 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acid-amino acid ligase activity 4.03401034724886 bayes_pls_golite062009
tetrahydrofolylpolyglutamate synthase activity 3.94486215528378 bayes_pls_golite062009
ligase activity 3.80574681739772 bayes_pls_golite062009
catalytic activity 2.66037860982128 bayes_pls_golite062009
dihydrofolate synthase activity 2.50201834836027 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 1.96801058335544 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle