| Protein: | gi|208967843 |
| Organism: | synthetic construct |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208967843.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..642] | [9..650] |
|
|
0.0 | [2..642] | [1..641] |
|
|
0.0 | [1..642] | [1..647] |
|
|
0.0 | [1..642] | [1..647] |
|
|
0.0 | [2..597] | [1..596] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MMRLRGSGML RDLLLRSPAG VSATLRRAQP LVTLCRRPRG GGRPAAGPAA AARLHPWWGG 60
61 GGWPAEPLAR GLSSSPSEIL QELGKGSTHP QPGVSPPAAP AAPGPKDGPG ET
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-217] |
1 11 21 31 41 51
| | | | | |
1 DAFGNSEGKE LVASGENKIK QGLLPSLEDL LFYTIAEGQE KIPVHKFITA LKSTGLRTSD 60
61 PRLKECMDML RLTLQTTSDG VMLDKDLFKK CVQSNIVLLT QAFRR
|
| Detection Method: | |
| Confidence: | 1.07 |
| Match: | 2amiA |
| Description: | Solution Structure Of The Calcium-loaded N-Terminal Sensor Domain Of Centrin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [218-325] |
1 11 21 31 41 51
| | | | | |
1 KFVIPDFMSF TSHIDELYES AKKQSGGKVA DYIPQLAKFS PDLWGVSVCT VDGQRHSTGD 60
61 TKVPFCLQSC VKPLKYAIAV NDLGTEYVHR YVGKEPSGLR FNKLFLNE
|
| Detection Method: | |
| Confidence: | 53.221849 |
| Match: | 2pbyA |
| Description: | No description for 2pbyA was found. |
|
Region A: Residues: [326-669] |
1 11 21 31 41 51
| | | | | |
1 DDKPHNPMVN AGAIVVTSLI KQGVNNAEKF DYVMQFLNKM AGNEYVGFSN ATFQSERESG 60
61 DRNFAIGYYL KEKKCFPEGT DMVGILDFYF QLCSIEVTCE SASVMAATLA NGGFCPITGE 120
121 RVLSPEAVRN TLSLMHSCGM YDFSGQFAFH VGLPAKSGVA GGILLVVPNV MGMMCWSPPL 180
181 DKMGNSVKGI HFCHDLVSLC NFHNYDNLRH FAKKLDPRRE GGDQRVKSVI NLLFAAYTGD 240
241 VSALRRFALS AMDMEQRDYD SRTALHVAAA EGHVEVVKFL LEACKVNPFP KDRWNNTPMD 300
301 EALHFGHHDV FKILQEYQVQ YTPQGDSDNG KENQTVHKNL DGLL
|
| Detection Method: | |
| Confidence: | 58.522879 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.98134935593201 | bayes_pls_golite062009 |
| protein binding | 1.54890102798695 | bayes_pls_golite062009 |
| transcription factor binding | 0.3605141689847 | bayes_pls_golite062009 |
